Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306C12f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY847597-1|AAW32540.1| 664|Homo sapiens lamin A/C transcript va... 84 3e-16
X03445-1|CAA27174.1| 572|Homo sapiens protein ( Human mRNA for ... 82 1e-15
X03444-1|CAA27173.1| 702|Homo sapiens protein ( Human mRNA for ... 82 1e-15
M13452-1|AAA36160.1| 515|Homo sapiens protein ( Human lamin A m... 82 1e-15
M13451-1|AAA36164.1| 572|Homo sapiens protein ( Human lamin C m... 82 1e-15
BC014507-1|AAH14507.1| 664|Homo sapiens lamin A/C protein. 82 1e-15
BC003162-1|AAH03162.1| 572|Homo sapiens lamin A/C protein. 82 1e-15
BC000511-1|AAH00511.1| 572|Homo sapiens lamin A/C protein. 82 1e-15
AY847595-1|AAW32538.1| 664|Homo sapiens lamin A/C transcript va... 82 1e-15
AY357727-1|AAR29466.1| 614|Homo sapiens progerin protein. 82 1e-15
AL135927-8|CAI15527.1| 491|Homo sapiens lamin A/C protein. 82 1e-15
AL135927-7|CAI15526.1| 513|Homo sapiens lamin A/C protein. 82 1e-15
AL135927-4|CAI15522.1| 664|Homo sapiens lamin A/C protein. 82 1e-15
AL135927-3|CAI15523.1| 614|Homo sapiens lamin A/C protein. 82 1e-15
AL135927-2|CAI15521.1| 572|Homo sapiens lamin A/C protein. 82 1e-15
AF381029-1|AAK59326.1| 260|Homo sapiens lamin Adel10 protein. 76 9e-14
M94362-1|AAA80979.1| 515|Homo sapiens lamin B2 protein. 74 4e-13
BT007441-1|AAP36109.1| 600|Homo sapiens lamin B1 protein. 74 4e-13
BC006551-1|AAH06551.1| 600|Homo sapiens lamin B2 protein. 74 4e-13
M34458-1|AAA36162.1| 586|Homo sapiens protein ( Human lamin B m... 71 2e-12
L37747-1|AAC37575.1| 586|Homo sapiens lamin B1 protein. 71 2e-12
BC103723-1|AAI03724.1| 586|Homo sapiens lamin B1 protein. 71 2e-12
BC012295-1|AAH12295.1| 586|Homo sapiens lamin B1 protein. 71 2e-12
BC037957-1|AAH37957.1| 291|Homo sapiens IFLTD1 protein protein. 49 1e-05
AK093323-1|BAC04132.1| 388|Homo sapiens protein ( Homo sapiens ... 49 1e-05
AY847596-1|AAW32539.1| 480|Homo sapiens lamin A/C transcript va... 36 0.086
Z99716-2|CAI41689.1| 177|Homo sapiens protein ( Human DNA seque... 32 1.1
BC036762-1|AAH36762.1| 348|Homo sapiens hypothetical protein MG... 30 5.7
>AY847597-1|AAW32540.1| 664|Homo sapiens lamin A/C transcript
variant 1 protein.
Length = 664
Score = 83.8 bits (198), Expect = 3e-16
Identities = 42/104 (40%), Positives = 64/104 (61%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 VAEACPDGTFVKIRNKGKKELSLGGYQILRKAGDQETV-FKFHRTVKLEPGAVSTVWSAD 180
V E +G FV++RNK ++ S+G +QI R+ GD + ++F L+ G V T+W+A
Sbjct: 442 VEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAG 501
Query: 181 TGASHDPPHDIVMKGQK-WFVADTFTTALLNNEQEEVAISERQR 309
GA+H PP D+V K Q W ++ TAL+N+ EEVA+S+ R
Sbjct: 502 AGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMSKLVR 545
>X03445-1|CAA27174.1| 572|Homo sapiens protein ( Human mRNA for
nuclear envelope protein lamin C precursor. ).
Length = 572
Score = 81.8 bits (193), Expect = 1e-15
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 VAEACPDGTFVKIRNKGKKELSLGGYQILRKAGDQETV-FKFHRTVKLEPGAVSTVWSAD 180
V E +G FV++RNK ++ S+G +QI R+ GD + ++F L+ G V T+W+A
Sbjct: 442 VEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAG 501
Query: 181 TGASHDPPHDIVMKGQK-WFVADTFTTALLNNEQEEVAISERQR 309
GA+H PP D+V K Q W ++ TAL+N+ EEVA+ + R
Sbjct: 502 AGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVR 545
>X03444-1|CAA27173.1| 702|Homo sapiens protein ( Human mRNA for
nuclear envelope protein lamin A precursor. ).
Length = 702
Score = 81.8 bits (193), Expect = 1e-15
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 VAEACPDGTFVKIRNKGKKELSLGGYQILRKAGDQETV-FKFHRTVKLEPGAVSTVWSAD 180
V E +G FV++RNK ++ S+G +QI R+ GD + ++F L+ G V T+W+A
Sbjct: 442 VEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAG 501
Query: 181 TGASHDPPHDIVMKGQK-WFVADTFTTALLNNEQEEVAISERQR 309
GA+H PP D+V K Q W ++ TAL+N+ EEVA+ + R
Sbjct: 502 AGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVR 545
>M13452-1|AAA36160.1| 515|Homo sapiens protein ( Human lamin A
mRNA, 3'end. ).
Length = 515
Score = 81.8 bits (193), Expect = 1e-15
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 VAEACPDGTFVKIRNKGKKELSLGGYQILRKAGDQETV-FKFHRTVKLEPGAVSTVWSAD 180
V E +G FV++RNK ++ S+G +QI R+ GD + ++F L+ G V T+W+A
Sbjct: 293 VEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAG 352
Query: 181 TGASHDPPHDIVMKGQK-WFVADTFTTALLNNEQEEVAISERQR 309
GA+H PP D+V K Q W ++ TAL+N+ EEVA+ + R
Sbjct: 353 AGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVR 396
>M13451-1|AAA36164.1| 572|Homo sapiens protein ( Human lamin C
mRNA, complete cds. ).
Length = 572
Score = 81.8 bits (193), Expect = 1e-15
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 VAEACPDGTFVKIRNKGKKELSLGGYQILRKAGDQETV-FKFHRTVKLEPGAVSTVWSAD 180
V E +G FV++RNK ++ S+G +QI R+ GD + ++F L+ G V T+W+A
Sbjct: 442 VEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAG 501
Query: 181 TGASHDPPHDIVMKGQK-WFVADTFTTALLNNEQEEVAISERQR 309
GA+H PP D+V K Q W ++ TAL+N+ EEVA+ + R
Sbjct: 502 AGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVR 545
>BC014507-1|AAH14507.1| 664|Homo sapiens lamin A/C protein.
Length = 664
Score = 81.8 bits (193), Expect = 1e-15
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 VAEACPDGTFVKIRNKGKKELSLGGYQILRKAGDQETV-FKFHRTVKLEPGAVSTVWSAD 180
V E +G FV++RNK ++ S+G +QI R+ GD + ++F L+ G V T+W+A
Sbjct: 442 VEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAG 501
Query: 181 TGASHDPPHDIVMKGQK-WFVADTFTTALLNNEQEEVAISERQR 309
GA+H PP D+V K Q W ++ TAL+N+ EEVA+ + R
Sbjct: 502 AGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVR 545
>BC003162-1|AAH03162.1| 572|Homo sapiens lamin A/C protein.
Length = 572
Score = 81.8 bits (193), Expect = 1e-15
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 VAEACPDGTFVKIRNKGKKELSLGGYQILRKAGDQETV-FKFHRTVKLEPGAVSTVWSAD 180
V E +G FV++RNK ++ S+G +QI R+ GD + ++F L+ G V T+W+A
Sbjct: 442 VEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAG 501
Query: 181 TGASHDPPHDIVMKGQK-WFVADTFTTALLNNEQEEVAISERQR 309
GA+H PP D+V K Q W ++ TAL+N+ EEVA+ + R
Sbjct: 502 AGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVR 545
>BC000511-1|AAH00511.1| 572|Homo sapiens lamin A/C protein.
Length = 572
Score = 81.8 bits (193), Expect = 1e-15
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 VAEACPDGTFVKIRNKGKKELSLGGYQILRKAGDQETV-FKFHRTVKLEPGAVSTVWSAD 180
V E +G FV++RNK ++ S+G +QI R+ GD + ++F L+ G V T+W+A
Sbjct: 442 VEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAG 501
Query: 181 TGASHDPPHDIVMKGQK-WFVADTFTTALLNNEQEEVAISERQR 309
GA+H PP D+V K Q W ++ TAL+N+ EEVA+ + R
Sbjct: 502 AGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVR 545
>AY847595-1|AAW32538.1| 664|Homo sapiens lamin A/C transcript
variant 1 protein.
Length = 664
Score = 81.8 bits (193), Expect = 1e-15
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 VAEACPDGTFVKIRNKGKKELSLGGYQILRKAGDQETV-FKFHRTVKLEPGAVSTVWSAD 180
V E +G FV++RNK ++ S+G +QI R+ GD + ++F L+ G V T+W+A
Sbjct: 442 VEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAG 501
Query: 181 TGASHDPPHDIVMKGQK-WFVADTFTTALLNNEQEEVAISERQR 309
GA+H PP D+V K Q W ++ TAL+N+ EEVA+ + R
Sbjct: 502 AGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVR 545
>AY357727-1|AAR29466.1| 614|Homo sapiens progerin protein.
Length = 614
Score = 81.8 bits (193), Expect = 1e-15
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 VAEACPDGTFVKIRNKGKKELSLGGYQILRKAGDQETV-FKFHRTVKLEPGAVSTVWSAD 180
V E +G FV++RNK ++ S+G +QI R+ GD + ++F L+ G V T+W+A
Sbjct: 442 VEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAG 501
Query: 181 TGASHDPPHDIVMKGQK-WFVADTFTTALLNNEQEEVAISERQR 309
GA+H PP D+V K Q W ++ TAL+N+ EEVA+ + R
Sbjct: 502 AGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVR 545
>AL135927-8|CAI15527.1| 491|Homo sapiens lamin A/C protein.
Length = 491
Score = 81.8 bits (193), Expect = 1e-15
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 VAEACPDGTFVKIRNKGKKELSLGGYQILRKAGDQETV-FKFHRTVKLEPGAVSTVWSAD 180
V E +G FV++RNK ++ S+G +QI R+ GD + ++F L+ G V T+W+A
Sbjct: 361 VEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAG 420
Query: 181 TGASHDPPHDIVMKGQK-WFVADTFTTALLNNEQEEVAISERQR 309
GA+H PP D+V K Q W ++ TAL+N+ EEVA+ + R
Sbjct: 421 AGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVR 464
>AL135927-7|CAI15526.1| 513|Homo sapiens lamin A/C protein.
Length = 513
Score = 81.8 bits (193), Expect = 1e-15
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 VAEACPDGTFVKIRNKGKKELSLGGYQILRKAGDQETV-FKFHRTVKLEPGAVSTVWSAD 180
V E +G FV++RNK ++ S+G +QI R+ GD + ++F L+ G V T+W+A
Sbjct: 383 VEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAG 442
Query: 181 TGASHDPPHDIVMKGQK-WFVADTFTTALLNNEQEEVAISERQR 309
GA+H PP D+V K Q W ++ TAL+N+ EEVA+ + R
Sbjct: 443 AGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVR 486
>AL135927-4|CAI15522.1| 664|Homo sapiens lamin A/C protein.
Length = 664
Score = 81.8 bits (193), Expect = 1e-15
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 VAEACPDGTFVKIRNKGKKELSLGGYQILRKAGDQETV-FKFHRTVKLEPGAVSTVWSAD 180
V E +G FV++RNK ++ S+G +QI R+ GD + ++F L+ G V T+W+A
Sbjct: 442 VEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAG 501
Query: 181 TGASHDPPHDIVMKGQK-WFVADTFTTALLNNEQEEVAISERQR 309
GA+H PP D+V K Q W ++ TAL+N+ EEVA+ + R
Sbjct: 502 AGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVR 545
>AL135927-3|CAI15523.1| 614|Homo sapiens lamin A/C protein.
Length = 614
Score = 81.8 bits (193), Expect = 1e-15
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 VAEACPDGTFVKIRNKGKKELSLGGYQILRKAGDQETV-FKFHRTVKLEPGAVSTVWSAD 180
V E +G FV++RNK ++ S+G +QI R+ GD + ++F L+ G V T+W+A
Sbjct: 442 VEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAG 501
Query: 181 TGASHDPPHDIVMKGQK-WFVADTFTTALLNNEQEEVAISERQR 309
GA+H PP D+V K Q W ++ TAL+N+ EEVA+ + R
Sbjct: 502 AGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVR 545
>AL135927-2|CAI15521.1| 572|Homo sapiens lamin A/C protein.
Length = 572
Score = 81.8 bits (193), Expect = 1e-15
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 2/104 (1%)
Frame = +1
Query: 4 VAEACPDGTFVKIRNKGKKELSLGGYQILRKAGDQETV-FKFHRTVKLEPGAVSTVWSAD 180
V E +G FV++RNK ++ S+G +QI R+ GD + ++F L+ G V T+W+A
Sbjct: 442 VEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAG 501
Query: 181 TGASHDPPHDIVMKGQK-WFVADTFTTALLNNEQEEVAISERQR 309
GA+H PP D+V K Q W ++ TAL+N+ EEVA+ + R
Sbjct: 502 AGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVR 545
>AF381029-1|AAK59326.1| 260|Homo sapiens lamin Adel10 protein.
Length = 260
Score = 75.8 bits (178), Expect = 9e-14
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Frame = +1
Query: 4 VAEACPDGTFVKIRNKGKKELSLGGYQILRKAGDQETV-FKFHRTVKLEPGAVSTVWSAD 180
V E +G FV++RNK ++ S+G +QI R+ GD + ++F L+ G V T+W+A
Sbjct: 68 VEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAG 127
Query: 181 TGASHDPPHDIVMKGQK-WFVADTFTTALLNNEQE 282
GA+H PP D+V K Q W ++ TAL+N+ E
Sbjct: 128 AGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGE 162
>M94362-1|AAA80979.1| 515|Homo sapiens lamin B2 protein.
Length = 515
Score = 73.7 bits (173), Expect = 4e-13
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Frame = +1
Query: 22 DGTFVKIRNKGKKELSLGGYQILRKAGD-QETVFKFHRTVKLEPGAVSTVWSADTGASHD 198
+G FV+++N K+ SLG ++I R+ + +E +KF L G + TVW+A G +H
Sbjct: 377 EGKFVQLKNNSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYILRAGQMVTVWAAGAGVAHS 436
Query: 199 PPHDIVMKGQ-KWFVADTFTTALLNNEQEEVAISERQRRQISTSAQRHRE 345
PP +V KGQ W ++F T L+N + EEVA+ ++ + + E
Sbjct: 437 PPSTLVWKGQSSWGTGESFRTVLVNADGEEVAMRTVKKSSVMRENENGEE 486
>BT007441-1|AAP36109.1| 600|Homo sapiens lamin B1 protein.
Length = 600
Score = 73.7 bits (173), Expect = 4e-13
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Frame = +1
Query: 22 DGTFVKIRNKGKKELSLGGYQILRKAGD-QETVFKFHRTVKLEPGAVSTVWSADTGASHD 198
+G FV+++N K+ SLG ++I R+ + +E +KF L G + TVW+A G +H
Sbjct: 462 EGKFVQLKNNSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYILRAGQMVTVWAAGAGVAHS 521
Query: 199 PPHDIVMKGQ-KWFVADTFTTALLNNEQEEVAISERQRRQISTSAQRHRE 345
PP +V KGQ W ++F T L+N + EEVA+ ++ + + E
Sbjct: 522 PPSTLVWKGQSSWGTGESFRTVLVNADGEEVAMRTVKKSSVMRENENGEE 571
>BC006551-1|AAH06551.1| 600|Homo sapiens lamin B2 protein.
Length = 600
Score = 73.7 bits (173), Expect = 4e-13
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Frame = +1
Query: 22 DGTFVKIRNKGKKELSLGGYQILRKAGD-QETVFKFHRTVKLEPGAVSTVWSADTGASHD 198
+G FV+++N K+ SLG ++I R+ + +E +KF L G + TVW+A G +H
Sbjct: 462 EGKFVQLKNNSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYILRAGQMVTVWAAGAGVAHS 521
Query: 199 PPHDIVMKGQ-KWFVADTFTTALLNNEQEEVAISERQRRQISTSAQRHRE 345
PP +V KGQ W ++F T L+N + EEVA+ ++ + + E
Sbjct: 522 PPSTLVWKGQSSWGTGESFRTVLVNADGEEVAMRTVKKSSVMRENENGEE 571
>M34458-1|AAA36162.1| 586|Homo sapiens protein ( Human lamin B
mRNA, complete cds. ).
Length = 586
Score = 71.3 bits (167), Expect = 2e-12
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +1
Query: 4 VAEACPDGTFVKIRNKGKKELSLGGYQILRKAGDQETVFKFHRTVKLEPGAVSTVWSADT 183
+ E DG F++++N +++ +GG++++RK GD +K+ L+ G T+W+A+
Sbjct: 444 IEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKIGDTSVSYKYTSRYVLKAGQTVTIWAANA 503
Query: 184 GASHDPPHDIVMKGQ-KWFVADTFTTALLNNEQEEVA 291
G + PP D++ K Q W + L N++ EEVA
Sbjct: 504 GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGEEVA 540
>L37747-1|AAC37575.1| 586|Homo sapiens lamin B1 protein.
Length = 586
Score = 71.3 bits (167), Expect = 2e-12
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +1
Query: 4 VAEACPDGTFVKIRNKGKKELSLGGYQILRKAGDQETVFKFHRTVKLEPGAVSTVWSADT 183
+ E DG F++++N +++ +GG++++RK GD +K+ L+ G T+W+A+
Sbjct: 444 IEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKIGDTSVSYKYTSRYVLKAGQTVTIWAANA 503
Query: 184 GASHDPPHDIVMKGQ-KWFVADTFTTALLNNEQEEVA 291
G + PP D++ K Q W + L N++ EEVA
Sbjct: 504 GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGEEVA 540
>BC103723-1|AAI03724.1| 586|Homo sapiens lamin B1 protein.
Length = 586
Score = 71.3 bits (167), Expect = 2e-12
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +1
Query: 4 VAEACPDGTFVKIRNKGKKELSLGGYQILRKAGDQETVFKFHRTVKLEPGAVSTVWSADT 183
+ E DG F++++N +++ +GG++++RK GD +K+ L+ G T+W+A+
Sbjct: 444 IEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKIGDTSVSYKYTSRYVLKAGQTVTIWAANA 503
Query: 184 GASHDPPHDIVMKGQ-KWFVADTFTTALLNNEQEEVA 291
G + PP D++ K Q W + L N++ EEVA
Sbjct: 504 GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGEEVA 540
>BC012295-1|AAH12295.1| 586|Homo sapiens lamin B1 protein.
Length = 586
Score = 71.3 bits (167), Expect = 2e-12
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +1
Query: 4 VAEACPDGTFVKIRNKGKKELSLGGYQILRKAGDQETVFKFHRTVKLEPGAVSTVWSADT 183
+ E DG F++++N +++ +GG++++RK GD +K+ L+ G T+W+A+
Sbjct: 444 IEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKIGDTSVSYKYTSRYVLKAGQTVTIWAANA 503
Query: 184 GASHDPPHDIVMKGQ-KWFVADTFTTALLNNEQEEVA 291
G + PP D++ K Q W + L N++ EEVA
Sbjct: 504 GVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGEEVA 540
>BC037957-1|AAH37957.1| 291|Homo sapiens IFLTD1 protein protein.
Length = 291
Score = 48.8 bits (111), Expect = 1e-05
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +1
Query: 1 EVAEACPDGTFVKIRNKG-KKELSLGGYQILRKAGDQE-TVFKFHRTVKLEPGAVSTVWS 174
E+AE G FVK+ N KE+++G + + + Q ++++F + ++ + TVW+
Sbjct: 52 EIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVMQANSTVTVWA 111
Query: 175 ADTGASHDPPHDIVMKGQKWFVA 243
A + A H PP D + K Q F A
Sbjct: 112 AASEAKHQPPSDFLWKEQDKFRA 134
>AK093323-1|BAC04132.1| 388|Homo sapiens protein ( Homo sapiens
cDNA FLJ36004 fis, clone TESTI2015331, weakly similar to
LAMIN B3. ).
Length = 388
Score = 48.8 bits (111), Expect = 1e-05
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +1
Query: 1 EVAEACPDGTFVKIRNKG-KKELSLGGYQILRKAGDQE-TVFKFHRTVKLEPGAVSTVWS 174
E+AE G FVK+ N KE+++G + + + Q ++++F + ++ + TVW+
Sbjct: 149 EIAEVNVKGLFVKLINSSLDKEMAIGDHILQQNVNGQTISLYRFLPNIVMQANSTVTVWA 208
Query: 175 ADTGASHDPPHDIVMKGQKWFVA 243
A + A H PP D + K Q F A
Sbjct: 209 AASEAKHQPPSDFLWKEQDKFRA 231
>AY847596-1|AAW32539.1| 480|Homo sapiens lamin A/C transcript
variant 1 protein.
Length = 480
Score = 35.9 bits (79), Expect = 0.086
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 4 VAEACPDGTFVKIRNKGKKELSLGGYQILRKAGD 105
V E +G FV++RNK ++ S+G +QI R+ GD
Sbjct: 442 VEEVDEEGKFVRLRNKSNEDQSMGNWQIKRQNGD 475
>Z99716-2|CAI41689.1| 177|Homo sapiens protein ( Human DNA sequence
from clone CTA-250D10 on chromosome 22 Contains the
genes for SREBF2 (sterol regulatory element binding
transcription factosterol regulatory element binding
transcription factor 2).
Length = 177
Score = 32.3 bits (70), Expect = 1.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 508 AESKDPKGRNMRHRVSSPGWICPGRD 431
+E+ P G H +PGW+CPG D
Sbjct: 149 SEAAGPPGATASHPGPTPGWLCPGAD 174
>BC036762-1|AAH36762.1| 348|Homo sapiens hypothetical protein
MGC46336 protein.
Length = 348
Score = 29.9 bits (64), Expect = 5.7
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 227 CPFMTMSCGGSCEAPVSADHTVLTAPGSSFTVRWNLNTVS*SPA 96
CPF SCG S S VL PG ++ +VS +P+
Sbjct: 143 CPFCCCSCGDSVNEKTSLSQRVLPHPGEKTCRGGSVESVSLAPS 186
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,364,342
Number of Sequences: 237096
Number of extensions: 1442323
Number of successful extensions: 3954
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3921
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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