Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306C11f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1; ...    83   3e-15
UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1; ...    41   0.015
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    38   0.18 
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ...    36   0.74 
UniRef50_Q97I82 Cluster: Uncharacterized protein, ykrI B.subtili...    32   6.9  

>UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 77

 Score = 83.4 bits (197), Expect = 3e-15
 Identities = 39/51 (76%), Positives = 41/51 (80%)
 Frame = +3

Query: 180 QYYLLSLLADPADFVAPQSINTRPKLSYKINLKQTKGIRPTGGTSKEKQNC 332
           Q   + +LADPADFV PQSIN RPK  YKINLKQTKGIR TG TSKEKQNC
Sbjct: 15  QILFMIILADPADFVVPQSINKRPKHLYKINLKQTKGIRQTGDTSKEKQNC 65


>UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 47

 Score = 41.1 bits (92), Expect = 0.015
 Identities = 19/24 (79%), Positives = 19/24 (79%)
 Frame = -2

Query: 445 LEKSWTDLANFGLELFVEVQRRFK 374
           LE  WTDLANFGLEL VEVQR  K
Sbjct: 22  LENGWTDLANFGLELPVEVQRGLK 45


>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 37.5 bits (83), Expect = 0.18
 Identities = 18/25 (72%), Positives = 18/25 (72%)
 Frame = +1

Query: 415 NLPNRSSSSRGGARYPIRPIVSRIT 489
           N   R    RGGARYPIRPIVSRIT
Sbjct: 251 NQAYRYRRPRGGARYPIRPIVSRIT 275


>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
           uncultured bacterium|Rep: Non-ribosomal peptide
           synthetase - uncultured bacterium
          Length = 338

 Score = 35.5 bits (78), Expect = 0.74
 Identities = 19/37 (51%), Positives = 22/37 (59%)
 Frame = -2

Query: 484 YDSL*GELGTGPPLEKSWTDLANFGLELFVEVQRRFK 374
           YDSL GELGTGPPLE    D     +E  +E  R +K
Sbjct: 278 YDSLYGELGTGPPLEVDGID--KLDIEFPIESARLYK 312


>UniRef50_Q97I82 Cluster: Uncharacterized protein, ykrI B.subtilis
           homolog; n=1; Clostridium acetobutylicum|Rep:
           Uncharacterized protein, ykrI B.subtilis homolog -
           Clostridium acetobutylicum
          Length = 247

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 186 YLLSLLADPADFVAPQSINTRPKLSYKINLKQTK 287
           Y L +L +  DF+    +NTR K+  +IN+K  K
Sbjct: 11  YKLIILTEKGDFIEIDKLNTRAKIGQEINIKSKK 44


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 468,003,491
Number of Sequences: 1657284
Number of extensions: 8862989
Number of successful extensions: 18334
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18330
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)