Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306C11f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1091 + 23899825-23900649,23900750-23900998,23901104-239011...    30   1.3  
01_03_0206 - 13783169-13783651,13783761-13783903,13783962-137841...    29   1.7  

>07_03_1091 +
           23899825-23900649,23900750-23900998,23901104-23901195,
           23901413-23902193
          Length = 648

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +3

Query: 222 VAPQSINTRPKLSYKINLKQTKGIRPTGGTSKEKQNC 332
           ++P S +TRP  S K++L ++K + P    SK K NC
Sbjct: 471 LSPFSSHTRPTESPKLSLAESKPMTPLFCCSKPKCNC 507


>01_03_0206 -
           13783169-13783651,13783761-13783903,13783962-13784128,
           13784641-13785149,13786031-13786312,13786397-13786792,
           13787232-13787504
          Length = 750

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 19  IRLATRHFFRK*KLFISDRYNLFCNFWFNSW*LFC 123
           +RL T+  +R  KL I   +NL C  W  +W L+C
Sbjct: 336 LRLRTQRCYRSLKLNIP-LFNLSCKNWQKTWHLYC 369


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,241,083
Number of Sequences: 37544
Number of extensions: 228754
Number of successful extensions: 440
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)