Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306C11f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 52 2e-07
SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37) 52 2e-07
SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4) 52 2e-07
SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40) 52 2e-07
SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_10526| Best HMM Match : CUE (HMM E-Value=6.5) 52 2e-07
SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_4159| Best HMM Match : Vpu (HMM E-Value=2) 52 2e-07
SB_49172| Best HMM Match : UCR_TM (HMM E-Value=9.8) 48 4e-06
SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_51122| Best HMM Match : UCR_TM (HMM E-Value=5.5) 48 6e-06
SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6) 43 2e-04
SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_28728| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_24487| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_31506| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_25896| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_11515| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_46058| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_45641| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_38028| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_14784| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_14409| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_14212| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_6530| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_3496| Best HMM Match : Herpes_UL49_5 (HMM E-Value=7.2) 36 0.020
SB_1689| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_8267| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.047
SB_1214| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_9891| Best HMM Match : KE2 (HMM E-Value=1) 27 7.1
SB_53034| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_32211| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_16375| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 519 HDVVKRRPVNCNTTHYRANW 460
HDVVKRRPVNCNTTHYRANW
Sbjct: 5 HDVVKRRPVNCNTTHYRANW 24
>SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 519 HDVVKRRPVNCNTTHYRANW 460
HDVVKRRPVNCNTTHYRANW
Sbjct: 61 HDVVKRRPVNCNTTHYRANW 80
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 519 HDVVKRRPVNCNTTHYRANW 460
HDVVKRRPVNCNTTHYRANW
Sbjct: 629 HDVVKRRPVNCNTTHYRANW 648
>SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 519 HDVVKRRPVNCNTTHYRANW 460
HDVVKRRPVNCNTTHYRANW
Sbjct: 40 HDVVKRRPVNCNTTHYRANW 59
>SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37)
Length = 257
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 519 HDVVKRRPVNCNTTHYRANW 460
HDVVKRRPVNCNTTHYRANW
Sbjct: 2 HDVVKRRPVNCNTTHYRANW 21
>SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4)
Length = 117
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 519 HDVVKRRPVNCNTTHYRANW 460
HDVVKRRPVNCNTTHYRANW
Sbjct: 42 HDVVKRRPVNCNTTHYRANW 61
>SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1907
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 519 HDVVKRRPVNCNTTHYRANW 460
HDVVKRRPVNCNTTHYRANW
Sbjct: 1880 HDVVKRRPVNCNTTHYRANW 1899
>SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 519 HDVVKRRPVNCNTTHYRANW 460
HDVVKRRPVNCNTTHYRANW
Sbjct: 40 HDVVKRRPVNCNTTHYRANW 59
>SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 519 HDVVKRRPVNCNTTHYRANW 460
HDVVKRRPVNCNTTHYRANW
Sbjct: 2 HDVVKRRPVNCNTTHYRANW 21
>SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40)
Length = 768
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 519 HDVVKRRPVNCNTTHYRANW 460
HDVVKRRPVNCNTTHYRANW
Sbjct: 34 HDVVKRRPVNCNTTHYRANW 53
>SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 519 HDVVKRRPVNCNTTHYRANW 460
HDVVKRRPVNCNTTHYRANW
Sbjct: 83 HDVVKRRPVNCNTTHYRANW 102
>SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 519 HDVVKRRPVNCNTTHYRANW 460
HDVVKRRPVNCNTTHYRANW
Sbjct: 61 HDVVKRRPVNCNTTHYRANW 80
>SB_10526| Best HMM Match : CUE (HMM E-Value=6.5)
Length = 281
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 519 HDVVKRRPVNCNTTHYRANW 460
HDVVKRRPVNCNTTHYRANW
Sbjct: 72 HDVVKRRPVNCNTTHYRANW 91
>SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 519 HDVVKRRPVNCNTTHYRANW 460
HDVVKRRPVNCNTTHYRANW
Sbjct: 48 HDVVKRRPVNCNTTHYRANW 67
>SB_4159| Best HMM Match : Vpu (HMM E-Value=2)
Length = 779
Score = 52.4 bits (120), Expect = 2e-07
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = -3
Query: 519 HDVVKRRPVNCNTTHYRANW 460
HDVVKRRPVNCNTTHYRANW
Sbjct: 72 HDVVKRRPVNCNTTHYRANW 91
>SB_49172| Best HMM Match : UCR_TM (HMM E-Value=9.8)
Length = 142
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = +1
Query: 424 NRSSSSRGGARYPIRPIVSRITIHWPSFYN 513
+R++++ GGA PIRPIVSRITIHWP+FYN
Sbjct: 29 SRAAATDGGA--PIRPIVSRITIHWPAFYN 56
>SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 48.0 bits (109), Expect = 5e-06
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -3
Query: 519 HDVVKRRPVNCNTTHYRAN 463
HDVVKRRPVNCNTTHYRAN
Sbjct: 22 HDVVKRRPVNCNTTHYRAN 40
>SB_51122| Best HMM Match : UCR_TM (HMM E-Value=5.5)
Length = 131
Score = 47.6 bits (108), Expect = 6e-06
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +1
Query: 424 NRSSSSRGGARYPIRPIVSRITIHWPSFYNVV 519
+R++++ GGA PIRPIVS ITIHWPSFYN V
Sbjct: 31 SRAAATVGGA--PIRPIVSHITIHWPSFYNGV 60
>SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6)
Length = 237
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -3
Query: 519 HDVVKRRPVNCNTTHYRAN 463
HD KRRPVNCNTTHYRAN
Sbjct: 79 HDGEKRRPVNCNTTHYRAN 97
>SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 41.1 bits (92), Expect = 5e-04
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 463 IRPIVSRITIHWPSFYNVV 519
+RP+VSRITIHW SFYNVV
Sbjct: 33 LRPVVSRITIHWTSFYNVV 51
>SB_28728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 463 IRPIVSRITIHWPSFY 510
IRPIVSRITIHWPSFY
Sbjct: 18 IRPIVSRITIHWPSFY 33
>SB_24487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +1
Query: 469 PIVSRITIHWPSFYNVV 519
P +SRITIHWPSFYNVV
Sbjct: 77 PYMSRITIHWPSFYNVV 93
>SB_31506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 478 SRITIHWPSFYNVV 519
SRITIHWPSFYNVV
Sbjct: 2 SRITIHWPSFYNVV 15
>SB_25896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 478 SRITIHWPSFYNVV 519
SRITIHWPSFYNVV
Sbjct: 2 SRITIHWPSFYNVV 15
>SB_11515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 478 SRITIHWPSFYNVV 519
SRITIHWPSFYNVV
Sbjct: 2 SRITIHWPSFYNVV 15
>SB_46058| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 478 SRITIHWPSFYNVV 519
SRITIHWPSFYNVV
Sbjct: 2 SRITIHWPSFYNVV 15
>SB_45641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 478 SRITIHWPSFYNVV 519
SRITIHWPSFYNVV
Sbjct: 2 SRITIHWPSFYNVV 15
>SB_38028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 478 SRITIHWPSFYNVV 519
SRITIHWPSFYNVV
Sbjct: 2 SRITIHWPSFYNVV 15
>SB_14784| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 478 SRITIHWPSFYNVV 519
SRITIHWPSFYNVV
Sbjct: 2 SRITIHWPSFYNVV 15
>SB_14409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 478 SRITIHWPSFYNVV 519
SRITIHWPSFYNVV
Sbjct: 2 SRITIHWPSFYNVV 15
>SB_14212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 478 SRITIHWPSFYNVV 519
SRITIHWPSFYNVV
Sbjct: 2 SRITIHWPSFYNVV 15
>SB_6530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 478 SRITIHWPSFYNVV 519
SRITIHWPSFYNVV
Sbjct: 2 SRITIHWPSFYNVV 15
>SB_3496| Best HMM Match : Herpes_UL49_5 (HMM E-Value=7.2)
Length = 98
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 478 SRITIHWPSFYNVV 519
SRITIHWPSFYNVV
Sbjct: 2 SRITIHWPSFYNVV 15
>SB_1689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 478 SRITIHWPSFYNVV 519
SRITIHWPSFYNVV
Sbjct: 2 SRITIHWPSFYNVV 15
>SB_8267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 34.7 bits (76), Expect = 0.047
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1
Query: 478 SRITIHWPSFYNVV 519
SRITIHWPSFYNV+
Sbjct: 2 SRITIHWPSFYNVM 15
>SB_1214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +1
Query: 430 SSSSRGGARYPIRPIVSRITIHWPSFYNVV 519
SS S+ R P HWPSFYNVV
Sbjct: 36 SSGSQRSRRDPQSRPAGMQAWHWPSFYNVV 65
>SB_9891| Best HMM Match : KE2 (HMM E-Value=1)
Length = 572
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 201 LADPADFVAPQSINTRPKLSYKINLKQTKGIR 296
LA P + PQS++ L YK K+T+ IR
Sbjct: 349 LAAPTPILPPQSVHNTGGLGYKDKTKKTQKIR 380
>SB_53034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1
Query: 493 HWPSFYNVV 519
HWPSFYNVV
Sbjct: 5 HWPSFYNVV 13
>SB_32211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1
Query: 493 HWPSFYNVV 519
HWPSFYNVV
Sbjct: 62 HWPSFYNVV 70
>SB_16375| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 27.1 bits (57), Expect = 9.4
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1
Query: 493 HWPSFYNVV 519
HWPSFYNVV
Sbjct: 5 HWPSFYNVV 13
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,203,528
Number of Sequences: 59808
Number of extensions: 268641
Number of successful extensions: 3547
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 3391
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3547
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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