Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306C06f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9X9L9 Cluster: Putative uncharacterized protein; n=1; ...    32   6.9  
UniRef50_Q22RQ8 Cluster: Putative uncharacterized protein; n=1; ...    32   6.9  
UniRef50_A0CVN3 Cluster: Chromosome undetermined scaffold_29, wh...    32   6.9  
UniRef50_Q0UL14 Cluster: Putative uncharacterized protein; n=1; ...    32   6.9  
UniRef50_A5K547 Cluster: Putative uncharacterized protein; n=4; ...    32   9.2  
UniRef50_Q0UEL9 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  

>UniRef50_Q9X9L9 Cluster: Putative uncharacterized protein; n=1;
           Streptococcus thermophilus|Rep: Putative uncharacterized
           protein - Streptococcus thermophilus
          Length = 442

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 24/68 (35%), Positives = 32/68 (47%)
 Frame = +2

Query: 17  ISLGDSVASKQSKNFSNRFSSFGAYSIQTNKQIFPLYNISIDFNNHLYCVNTELHQAVLK 196
           +SL D    K+S    +  + F AY I    +I  L  I   F+N L C+N E+ QA L 
Sbjct: 119 MSLLDDDTVKKSSGSEHYKTMFEAYLISV-LEIMELLGIKFSFSNILDCLNFEMIQADLL 177

Query: 197 KSPQLELS 220
                ELS
Sbjct: 178 HMKDEELS 185


>UniRef50_Q22RQ8 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1046

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +2

Query: 134 SIDFNNHLYCVNTELHQAVLKKSPQL 211
           SIDF + LYC +T  HQ + KKS ++
Sbjct: 690 SIDFIDRLYCCSTPNHQRIYKKSDEI 715


>UniRef50_A0CVN3 Cluster: Chromosome undetermined scaffold_29, whole
            genome shotgun sequence; n=3; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_29, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 3648

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 19/59 (32%), Positives = 33/59 (55%)
 Frame = +2

Query: 59   FSNRFSSFGAYSIQTNKQIFPLYNISIDFNNHLYCVNTELHQAVLKKSPQLELSIVNVL 235
            F+  F++F   S Q  K++  LY I I+FN + +  N +++ +  K   Q EL I N++
Sbjct: 1920 FNTNFAAFQKLSKQNKKKMI-LYPIKIEFNRNQFVCNCDVNYSNYKTDGQNEL-ISNII 1976


>UniRef50_Q0UL14 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 584

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +2

Query: 125 YNISIDFNNHLYCVNTELHQAVLKKSPQLELSIVNVL 235
           + ++ D    LY VN  +H+ ++ K+P L L +VN L
Sbjct: 284 FGLTYDPRTDLYLVNDTIHEQLVSKNPTLTLKLVNSL 320


>UniRef50_A5K547 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1990

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +2

Query: 17  ISLGDSVASKQSKNFSNRFSSFGAYSIQTNKQIFPLYN-ISIDFNNHLYCVNTELHQAVL 193
           IS+     +K   NFS   S    +S+  NKQ F   + +  + N+H Y     L+  +L
Sbjct: 380 ISIRKKSKNKHVDNFSVNVSELFEFSVFYNKQFFLYIDVVDTENNSHCYTCLINLNNKIL 439

Query: 194 KKS 202
           KK+
Sbjct: 440 KKT 442


>UniRef50_Q0UEL9 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 716

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 12/47 (25%), Positives = 25/47 (53%)
 Frame = -1

Query: 245 SFFRVHSLLKVLIVVISSKLLGATQYSHSTNDY*NLY*YYKEERFVC 105
           +F+R H L  ++++ ISS ++     +H   +Y   +  Y +  F+C
Sbjct: 30  NFYRAHMLYFIIVIAISSVIVYGAGIAHGPKEYGKAHLTYMDALFLC 76


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 385,220,478
Number of Sequences: 1657284
Number of extensions: 6010061
Number of successful extensions: 12200
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12200
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)