Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306C05f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    25   0.54 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.54 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.2  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   2.9  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   5.0  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 343 DITDPVTGKKVSKEQYKEDIERQTELYGRLKSTFN 447
           D  D +      +E+ +ED    T+++GR+KS  N
Sbjct: 158 DDDDALVSDSDDREKDEEDKRDDTDMHGRIKSERN 192


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -3

Query: 69  LVVFLMIRFAVFLYFENIPK 10
           +++F +I FAV LYF ++ K
Sbjct: 45  VIIFHLILFAVLLYFASLEK 64


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 134 VGTHCPSKRNFLAAS 90
           +G HC SK NF A S
Sbjct: 331 MGRHCESKVNFCATS 345


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 222 LLPRFRENMQNWRHS 266
           L P +R+N Q W++S
Sbjct: 173 LFPFYRQNQQRWQNS 187


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 228 PRFRENMQNWRHS 266
           P +REN Q W++S
Sbjct: 118 PYYRENKQGWQNS 130


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +1

Query: 214 EFYYCHDS 237
           +FYYC+DS
Sbjct: 250 QFYYCYDS 257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,161
Number of Sequences: 336
Number of extensions: 2409
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)