Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306C05f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00048-8|AAB53829.1| 160|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z74043-4|CAA98541.1| 733|Caenorhabditis elegans Hypothetical pr... 31 0.66
AF040655-11|AAB95040.1| 251|Caenorhabditis elegans Hypothetical... 29 2.0
AL110485-16|CAB60364.1| 295|Caenorhabditis elegans Hypothetical... 29 2.7
Z73103-5|CAA97422.1| 380|Caenorhabditis elegans Hypothetical pr... 28 3.5
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 28 4.7
U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated p... 28 4.7
U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated p... 28 4.7
U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated p... 28 4.7
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 28 4.7
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 28 4.7
Z82060-2|CAB04882.1| 421|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical pr... 27 8.1
>U00048-8|AAB53829.1| 160|Caenorhabditis elegans Hypothetical
protein C05D11.10 protein.
Length = 160
Score = 51.6 bits (118), Expect = 3e-07
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Frame = +1
Query: 151 AKIRVKRLELDENLLMYFRKEEFYYCHDSEKICKTGDIVLIQALP--EKLTKLITHEIKE 324
A++R + E + L YF + ++ D + GD VLI+ + + ++H +
Sbjct: 34 AQVRCQMNEFNIYLKKYFARSFDFWALDKTSLGNIGDTVLIKQIDGSSRPKANVSHAVDR 93
Query: 325 VVYPFGDITDPVTGKKVSKEQYKEDIE 405
VV+ FG+I DPVTG+K+ + + ++I+
Sbjct: 94 VVFKFGNIVDPVTGRKIFNDTFADEID 120
>Z74043-4|CAA98541.1| 733|Caenorhabditis elegans Hypothetical
protein T19B10.8 protein.
Length = 733
Score = 30.7 bits (66), Expect = 0.66
Identities = 15/58 (25%), Positives = 33/58 (56%)
Frame = +1
Query: 316 IKEVVYPFGDITDPVTGKKVSKEQYKEDIERQTELYGRLKSTFNYSKAPPRGWQDGKK 489
+ V++ + + D +TG++V ++ YKED++R + R K + + P + + G+K
Sbjct: 312 VSRVLWSYAENLDTLTGRQVVQKFYKEDVDRNIK---RAKLVRHVNDVPSKEIKIGEK 366
>AF040655-11|AAB95040.1| 251|Caenorhabditis elegans Hypothetical
protein T24E12.2 protein.
Length = 251
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 352 DPVTGKKVSKEQYKEDIERQTELYGRLKSTFNYSKAPPRGWQDGKKDF 495
DP GKKV Q K + Q+ LYG +ST +Y+ P+ + K+D+
Sbjct: 155 DP-NGKKVVP-QIKMFVRNQSSLYGNQRSTKSYNLPWPKIRSEDKEDW 200
>AL110485-16|CAB60364.1| 295|Caenorhabditis elegans Hypothetical
protein Y46G5A.22a protein.
Length = 295
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = -1
Query: 188 FSSNSNLFT----LIFAAFCLTVGTHCPSKRNFLAASATFLD 75
F S +N+FT +IFA++C +C S+R + +F+D
Sbjct: 238 FMSIANMFTRMDAIIFASYCEFAARYCRSRRLMCDVTCSFVD 279
>Z73103-5|CAA97422.1| 380|Caenorhabditis elegans Hypothetical
protein C08F8.6 protein.
Length = 380
Score = 28.3 bits (60), Expect = 3.5
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +1
Query: 235 SEKICKTGDIVLIQALPEKLTKLITHEIKEVVYPFGDITDPVTGKKVSKEQYKEDIERQT 414
+EK+ K ++ L + K TK +T KE+V + K+ KE+Y++D ++
Sbjct: 321 TEKVIKKKEVELAEGKSHKETKEVTKVSKEIVEEKKE-EKKEEKKEEKKEKYEDD--KKE 377
Query: 415 ELY 423
ELY
Sbjct: 378 ELY 380
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 4 ILFRNIFKIQEYSKTNH*KNNQEMSRNVADAARKFL 111
I+F NI I E+ KTN K ++ S N A F+
Sbjct: 1854 IIFANIVNILEFHKTNFLKEIEKCSENYEAAGAAFV 1889
>U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated
protein 73, isoform d protein.
Length = 552
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 4 ILFRNIFKIQEYSKTNH*KNNQEMSRNVADAARKFL 111
I+F NI I E+ KTN K ++ S N A F+
Sbjct: 208 IIFANIVNILEFHKTNFLKEIEKCSENYEAAGAAFV 243
>U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated
protein 73, isoform e protein.
Length = 633
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 4 ILFRNIFKIQEYSKTNH*KNNQEMSRNVADAARKFL 111
I+F NI I E+ KTN K ++ S N A F+
Sbjct: 289 IIFANIVNILEFHKTNFLKEIEKCSENYEAAGAAFV 324
>U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated
protein 73, isoform c protein.
Length = 928
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 4 ILFRNIFKIQEYSKTNH*KNNQEMSRNVADAARKFL 111
I+F NI I E+ KTN K ++ S N A F+
Sbjct: 294 IIFANIVNILEFHKTNFLKEIEKCSENYEAAGAAFV 329
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 4 ILFRNIFKIQEYSKTNH*KNNQEMSRNVADAARKFL 111
I+F NI I E+ KTN K ++ S N A F+
Sbjct: 1854 IIFANIVNILEFHKTNFLKEIEKCSENYEAAGAAFV 1889
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 4 ILFRNIFKIQEYSKTNH*KNNQEMSRNVADAARKFL 111
I+F NI I E+ KTN K ++ S N A F+
Sbjct: 1854 IIFANIVNILEFHKTNFLKEIEKCSENYEAAGAAFV 1889
>Z82060-2|CAB04882.1| 421|Caenorhabditis elegans Hypothetical
protein T27F6.2 protein.
Length = 421
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 443 NVDFNLPYNSVCLSISSLYCSLETFLPVTGS 351
N DFN YN C + SS S+ TF+ G+
Sbjct: 161 NCDFN--YNGYCYTFSSTTNSINTFISAQGT 189
>Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical
protein W08D2.7 protein.
Length = 1026
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 346 ITDPVTGKKVSKEQYKEDIERQTELYGRLKSTFNYSKAPPRGWQDGKKDFTSNQ 507
+ DP+ ++ + KE I R+ L GRL++ +S +D KK F Q
Sbjct: 761 LLDPIQDMEIKTVEMKELIAREKSLEGRLET---HSMTKRDNMKDLKKQFEQKQ 811
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,204,781
Number of Sequences: 27780
Number of extensions: 214758
Number of successful extensions: 613
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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