Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306C03f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 269 3e-71
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 251 8e-66
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 165 5e-61
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 213 2e-54
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 192 3e-48
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 175 4e-43
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 163 2e-39
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 163 3e-39
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 152 4e-36
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 150 2e-35
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 136 3e-31
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 102 4e-21
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 95 7e-19
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 87 2e-16
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 69 3e-16
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 84 2e-15
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 74 2e-12
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 59 2e-12
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 43 3e-09
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 59 5e-08
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 56 5e-07
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 54 3e-06
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 42 1e-04
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 38 3e-04
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 44 0.002
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 37 0.32
UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum... 36 0.74
UniRef50_Q0UX35 Cluster: Putative uncharacterized protein; n=1; ... 32 6.9
UniRef50_Q478C5 Cluster: Regulatory protein, LysR:LysR, substrat... 32 9.2
UniRef50_Q4P153 Cluster: Putative uncharacterized protein; n=1; ... 32 9.2
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 269 bits (659), Expect = 3e-71
Identities = 126/173 (72%), Positives = 139/173 (80%)
Frame = +1
Query: 1 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 180
KQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+T Q+AY+RI
Sbjct: 10 KQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDITVQIAYARI 69
Query: 181 EGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXE 360
EGD +VCAAYSHELP+YG++VGLTNYAAAY TG E
Sbjct: 70 EGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEE 129
Query: 361 YNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVSSXSIKRFP 519
+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGAVDGGLN+ S+KRFP
Sbjct: 130 FNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNI-PHSVKRFP 181
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 251 bits (614), Expect = 8e-66
Identities = 117/173 (67%), Positives = 133/173 (76%)
Frame = +1
Query: 1 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 180
K YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RI
Sbjct: 10 KAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARI 69
Query: 181 EGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXE 360
EGD IVCAAY+HELP+YGVKVGLTNYAAAY TG E
Sbjct: 70 EGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDE 129
Query: 361 YNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVSSXSIKRFP 519
YNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++ S KRFP
Sbjct: 130 YNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSI-PHSTKRFP 181
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 165 bits (400), Expect(2) = 5e-61
Identities = 72/80 (90%), Positives = 78/80 (97%)
Frame = +1
Query: 1 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 180
KQYFKR+QVKFKRRREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+TCQ+AYSRI
Sbjct: 10 KQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDITCQIAYSRI 69
Query: 181 EGDHIVCAAYSHELPRYGVK 240
EGD I+CAAYSHELPRYGVK
Sbjct: 70 EGDKILCAAYSHELPRYGVK 89
Score = 92.3 bits (219), Expect(2) = 5e-61
Identities = 44/54 (81%), Positives = 46/54 (85%)
Frame = +1
Query: 358 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVSSXSIKRFP 519
EYNVE V+NGPGAFRCYLDVGL RTTTGA VF AMKGAVDGGLN+ S KRFP
Sbjct: 98 EYNVESVENGPGAFRCYLDVGLNRTTTGACVFAAMKGAVDGGLNI-PHSTKRFP 150
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 213 bits (520), Expect = 2e-54
Identities = 101/164 (61%), Positives = 118/164 (71%)
Frame = +1
Query: 1 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 180
K YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV Q+AYS+I
Sbjct: 10 KAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDVVAQLAYSKI 69
Query: 181 EGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXE 360
EGD +V +AYSHELPRYG+KVGLTNYAAAY+TG +
Sbjct: 70 EGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGED 129
Query: 361 YNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNV 492
YNVE + F+ LD+GLARTTTG+++F MKG DGG+NV
Sbjct: 130 YNVEE-EGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINV 172
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 192 bits (469), Expect = 3e-48
Identities = 93/172 (54%), Positives = 113/172 (65%), Gaps = 2/172 (1%)
Frame = +1
Query: 7 YFKRYQVKFKRRREG--KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 180
Y RYQVKF RRR G KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQV Y+ +
Sbjct: 19 YQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQVVYATL 78
Query: 181 EGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXE 360
GD +CAAYSHELP+YG+K GLTNYAA Y+TG +
Sbjct: 79 SGDVTICAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTKYGLADAYEGKTEDLGED 138
Query: 361 YNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVSSXSIKRF 516
Y+VE D F+C+LD GL RT+TGARVF A+KGAVDGGL++ KRF
Sbjct: 139 YHVEQGDEEARPFKCFLDTGLVRTSTGARVFAALKGAVDGGLDIPHNE-KRF 189
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 175 bits (427), Expect = 4e-43
Identities = 88/179 (49%), Positives = 115/179 (64%), Gaps = 6/179 (3%)
Frame = +1
Query: 1 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 180
K YFKR+QVK++RRREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD+ Q+ ++I
Sbjct: 33 KAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDIIAQIVQAKI 92
Query: 181 EGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXE 360
GD +V AAY+HELP +G++ GLTNYAAAY+TG
Sbjct: 93 VGDEVVMAAYAHELPAFGIEHGLTNYAAAYATGLLLARRTLAKLGIADKFQGAKEADGSY 152
Query: 361 YNVEPVDNGPG------AFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVSSXSIKRFP 519
V + G F+ LDVGLARTTTGARVFG +KGAVDGG+ V RFP
Sbjct: 153 SAVRTKKDDEGDDEERFPFKAILDVGLARTTTGARVFGVLKGAVDGGMAVPHRP-NRFP 210
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 163 bits (397), Expect = 2e-39
Identities = 87/176 (49%), Positives = 105/176 (59%), Gaps = 3/176 (1%)
Frame = +1
Query: 1 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 180
K YFKRYQVK++RRREGKTDY ARK L++QDKNKYN K R IVR +N + CQ+A S I
Sbjct: 10 KAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQIICQIASSHI 69
Query: 181 EGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG---XXXXXXXXXXXXXXXXXXXXXXXX 351
EGD I+ A S EL RYG+ VGL NYAAAY+TG
Sbjct: 70 EGDKILSEAKSKELIRYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFIGVEKVTSES 129
Query: 352 XXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVSSXSIKRFP 519
E + + + +LDVG+ RTTTG RVF A+KGA DGGLN+ + RFP
Sbjct: 130 VAEDGDKEEEGDRKPIKAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGN-NRFP 184
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 163 bits (395), Expect = 3e-39
Identities = 83/171 (48%), Positives = 109/171 (63%)
Frame = +1
Query: 7 YFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEG 186
YFKR+Q KF+RRREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N + CQV Y+ ++G
Sbjct: 12 YFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKIICQVIYATLKG 71
Query: 187 DHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYN 366
D +V AA S EL R+G+ GLTNYAAAY+TG + N
Sbjct: 72 DKVVAAAESTELKRFGLTSGLTNYAAAYATG---LLLARRTLKTLKMDKFYEGNKTIDGN 128
Query: 367 VEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVSSXSIKRFP 519
++ P F LD+GL R+T G RVF A+KGA DGG+++ + +RFP
Sbjct: 129 LKTQRERP--FFAVLDIGLVRSTLGNRVFAALKGAADGGIHIPHNN-RRFP 176
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 152 bits (369), Expect = 4e-36
Identities = 73/165 (44%), Positives = 99/165 (60%)
Frame = +1
Query: 25 VKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCA 204
++ K+ +G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CA
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCA 366
Query: 205 AYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDN 384
A S+EL R+GV GL +YAAAY+TG +NV+
Sbjct: 367 ADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQK 426
Query: 385 GPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVSSXSIKRFP 519
F+ LD GL RTTTG RVFG +KGA DGG+N+ S RFP
Sbjct: 427 EKKPFKAILDAGLVRTTTGNRVFGVLKGACDGGINI-PHSESRFP 470
Score = 31.9 bits (69), Expect = 9.2
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 1 KQYFKRYQVKFKRRREGKTDYY 66
K YFKR+Q K++RRR GK YY
Sbjct: 22 KAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 150 bits (364), Expect = 2e-35
Identities = 77/160 (48%), Positives = 96/160 (60%)
Frame = +1
Query: 7 YFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEG 186
YF R+Q KF+RRRE KTDY R +L+ QDK KY KYRL+ R++N V Q+ + + G
Sbjct: 11 YFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQIVVAELTG 70
Query: 187 DHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYN 366
D VC A S ELP+YG+K+GL+NY AAY+TG EY
Sbjct: 71 DKTVCQALSTELPKYGIKLGLSNYPAAYATG---LLVARRFLTQMKLADVFKTEITEEYL 127
Query: 367 VEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGL 486
+ + P F+ LDVGLARTTTGA+VF MKGAVDGGL
Sbjct: 128 NDEENRRP--FKVILDVGLARTTTGAKVFAVMKGAVDGGL 165
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 136 bits (329), Expect = 3e-31
Identities = 72/171 (42%), Positives = 99/171 (57%), Gaps = 1/171 (0%)
Frame = +1
Query: 1 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 180
+ Y K +QVK +RRREGKTDY R ++ QD N + K+RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 181 EGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXE 360
+GD ++ A S EL RYG+ G TNY+AAY+TG
Sbjct: 64 DGDRVMVYADSRELERYGINFGATNYSAAYATG--FLIGRRALTAMSLDEVYRPKEIDGT 121
Query: 361 YNV-EPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVSSXSIK 510
Y+V + +D A R +LD+GLAR+T GARVFGA+KGA D GLNV + K
Sbjct: 122 YSVTKDIDGEKKAPRVFLDIGLARSTRGARVFGALKGASDAGLNVPHSAAK 172
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 102 bits (245), Expect = 4e-21
Identities = 59/128 (46%), Positives = 70/128 (54%)
Frame = +1
Query: 136 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 315
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 316 XXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVS 495
Y+VE +N F+ LDVG+ TTG RVFGA+KGA DGGL+V
Sbjct: 64 LDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHV- 122
Query: 496 SXSIKRFP 519
S KRFP
Sbjct: 123 PHSEKRFP 130
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 95.5 bits (227), Expect = 7e-19
Identities = 42/63 (66%), Positives = 50/63 (79%)
Frame = +1
Query: 1 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 180
+ Y KR+QVKFKRRR GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+T Q+ + I
Sbjct: 21 RAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASI 80
Query: 181 EGD 189
GD
Sbjct: 81 AGD 83
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 87.4 bits (207), Expect = 2e-16
Identities = 51/162 (31%), Positives = 80/162 (49%)
Frame = +1
Query: 7 YFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEG 186
Y R+++K +RRR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S ++G
Sbjct: 12 YHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSNVDG 71
Query: 187 DHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYN 366
D I+ ++Y L + K NY +Y G YN
Sbjct: 72 DFILLSSYLKNLSKLEYKNLTNNYPFSYLLG-----------YYFGKDLIEKVKQSETYN 120
Query: 367 VEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNV 492
+ N +D+GL R T G + F +MKG+VD G+N+
Sbjct: 121 KK---NYSSKITAIIDIGLKRATIGNKSFASMKGSVDSGINI 159
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 69.3 bits (162), Expect(2) = 3e-16
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = +1
Query: 16 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 195
RY+V +RRREGKT+YY R RLV + K R+ VR+SN+ + Q +RIEGD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
Query: 196 VCAAYSHEL-PRYGVKVGLTNYAAAYSTG 279
+ AA+S EL ++G K N AAY TG
Sbjct: 59 IAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
Score = 37.9 bits (84), Expect(2) = 3e-16
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 391 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNV 492
G LDVGL + G+RVF A+KGA+D G+ +
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEI 131
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 84.2 bits (199), Expect = 2e-15
Identities = 61/159 (38%), Positives = 80/159 (50%)
Frame = +1
Query: 16 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 195
RY V F+RR EGKTDYY R L+ TP R++VR +N+ + Q+ +EGD
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDST 58
Query: 196 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 375
+ AAYS EL YG + + AAY TG + V+
Sbjct: 59 LVAAYSAELAGYGYEGSTASTPAAYLTGML-------------------------FAVKA 93
Query: 376 VDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNV 492
++ G G LD+GLAR GARVF A+KGAVD GL+V
Sbjct: 94 LNAGYG--EAILDIGLARAKPGARVFAALKGAVDAGLDV 130
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 74.1 bits (174), Expect = 2e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +1
Query: 124 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 279
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
Score = 40.3 bits (90), Expect = 0.026
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +1
Query: 418 GLARTTTGARVFGAMKGAVDGGLNVSSXSIKRFP 519
GLARTTTG +VFGA+K VD GL++ S K FP
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSI-PHSTKCFP 103
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 58.8 bits (136), Expect(2) = 2e-12
Identities = 34/88 (38%), Positives = 48/88 (54%)
Frame = +1
Query: 16 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 195
RY+V +RRRE +TDY+ R RL+ + K RL+ R SNK V Q+ GD
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDT 58
Query: 196 VCAAYSHELPRYGVKVGLTNYAAAYSTG 279
+ +A+S +L YG + N +AY TG
Sbjct: 59 LASAHSSDLAEYGWEAPTGNMPSAYLTG 86
Score = 35.1 bits (77), Expect(2) = 2e-12
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 391 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNV 492
G LD+GL T G++VF +GA+D GL++
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDI 130
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 43.2 bits (97), Expect(2) = 3e-09
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +1
Query: 13 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 192
K +++FKRRR G+TDY R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 193 IVCAAYSHEL-PRYG--VKVGLTNYAAAYSTG 279
++ + L R+G + + A+Y TG
Sbjct: 58 VIISVTGKTLVDRFGWPLDASRKSVPASYLTG 89
Score = 40.3 bits (90), Expect(2) = 3e-09
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +1
Query: 391 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNV 492
G LDVGLA T+G RVF A++G VD GL++
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGLDI 133
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 59.3 bits (137), Expect = 5e-08
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = +1
Query: 16 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 195
RY+V F+RRREG+T+Y+ R +L++ ++ R++VR S ++V Q+ EGD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGDIT 58
Query: 196 VCAAYSHELPRYGVKVGLTNYAAAYSTG 279
+A S EL +YG N AAY TG
Sbjct: 59 YSSAVSSELAKYGYTGATGNTTAAYLTG 86
Score = 35.5 bits (78), Expect = 0.74
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 409 LDVGLARTTTGARVFGAMKGAVDGGLNVSSXS 504
LD+GL ++ G+RV+ A+KG VD G + S
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSS 134
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 56.0 bits (129), Expect = 5e-07
Identities = 22/32 (68%), Positives = 30/32 (93%)
Frame = +1
Query: 22 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPK 117
+++F+R +EGKTDYYARKRL +QDKN+YNTP+
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTPE 67
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 53.6 bits (123), Expect = 3e-06
Identities = 33/87 (37%), Positives = 47/87 (54%)
Frame = +1
Query: 19 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 198
Y+V+FKRRREGKT+Y R +LV DK R++VR+++ Q+ GD +
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGDETL 59
Query: 199 CAAYSHELPRYGVKVGLTNYAAAYSTG 279
+A S L +G N +AAY TG
Sbjct: 60 VSATSKNLKEFGWLGNGKNTSAAYLTG 86
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 42.3 bits (95), Expect(2) = 1e-04
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 31 FKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVA-YSRIEGDHIVCAA 207
FKR+ G TDY R +L+ + + K R IVR++ K V QVA YS I GD I+
Sbjct: 6 FKRKEAGITDYSKRLKLL-KSREK------RFIVRITGKGVIAQVAEYSDI-GDRILFTV 57
Query: 208 YSHELPRYGVKVGLTNYAAAYSTG 279
L +YGV + N Y G
Sbjct: 58 TDKTLAKYGVDLRGNNIQVCYLVG 81
Score = 25.4 bits (53), Expect(2) = 1e-04
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +1
Query: 391 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNV 492
G LD G + G R+ +KG D G+ V
Sbjct: 92 GVESAVLDTGRRKFRKGGRIAACLKGFTDAGIEV 125
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 38.3 bits (85), Expect(2) = 3e-04
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +1
Query: 7 YFKRYQVKFKRRREGKTDYYAR--KRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 180
YF ++ VK +R R+ T Y R + NK + K+R +N +++ + +S +
Sbjct: 12 YFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNTNLSGVITFSSL 69
Query: 181 EGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 279
GD IV A S +L ++G+ N +Y G
Sbjct: 70 SGDTIVAKASSMDLIKFGLIHSKKNLINSYFIG 102
Score = 27.9 bits (59), Expect(2) = 3e-04
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 397 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVSSXSIKR 513
F +D+G R R+ +KG +DGG+ + I +
Sbjct: 121 FLLTIDIGFKRLNEKGRINAFIKGLIDGGIQIPVSQIAK 159
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +1
Query: 358 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNV 492
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNI 86
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 36.7 bits (81), Expect = 0.32
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +1
Query: 34 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 213
KRRREG TDY R RLV+ + R ++R + K + Q+ EGDH++ +
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHVLVTVTN 60
Query: 214 HELPR 228
L +
Sbjct: 61 KTLKK 65
>UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L18 - Cenarchaeum
symbiosum
Length = 159
Score = 35.5 bits (78), Expect = 0.74
Identities = 22/82 (26%), Positives = 43/82 (52%)
Frame = +1
Query: 34 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 213
+R RE KT+Y ++R ++ + + T V +SN++ Q+ +++GD ++ + +S
Sbjct: 8 RRLREEKTNY-KKRRSMLMGRRDFVT------VHISNENAQVQIHAPKMDGDVVIASGHS 60
Query: 214 HELPRYGVKVGLTNYAAAYSTG 279
L G K + A+Y TG
Sbjct: 61 RYLASKGWKGSRKSIPASYLTG 82
>UniRef50_Q0UX35 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 503
Score = 32.3 bits (70), Expect = 6.9
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -2
Query: 274 LNMLQHNLSDQPSHHNVATHVNKQRTQYGHLQSESRPP 161
LN LQ +L D PSH T V + Q H Q + PP
Sbjct: 21 LNRLQPSLEDPPSHLQALTKVVMMQHQIPHQQQHALPP 58
>UniRef50_Q478C5 Cluster: Regulatory protein, LysR:LysR,
substrate-binding; n=1; Dechloromonas aromatica RCB|Rep:
Regulatory protein, LysR:LysR, substrate-binding -
Dechloromonas aromatica (strain RCB)
Length = 327
Score = 31.9 bits (69), Expect = 9.2
Identities = 18/80 (22%), Positives = 40/80 (50%)
Frame = +1
Query: 22 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVC 201
++K + R+G YY+ + V+ + +Y+ P RL+ +++ + A E H+
Sbjct: 4 RIKSRASRQGNW-YYSNQAFVLDETMRYDLPDLRLVAAIADSGSLTRAA----EQVHLAP 58
Query: 202 AAYSHELPRYGVKVGLTNYA 261
++ SH L + +G+ +A
Sbjct: 59 SSASHRLTQLEAALGIPLFA 78
>UniRef50_Q4P153 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 534
Score = 31.9 bits (69), Expect = 9.2
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = -2
Query: 310 VFEAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRTQYGHLQSESRPPGMLHLCWRDA 131
+F A+ DQ +L H++++ H+ A+H Q Q H Q + P + H A
Sbjct: 120 IFSAMNAAQFDQYGLLSHSVANASHQHHAASH-QHQHHQQPHHQHAAFNPALGHA----A 174
Query: 130 QSDDI 116
Q DDI
Sbjct: 175 QGDDI 179
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 501,074,179
Number of Sequences: 1657284
Number of extensions: 9525377
Number of successful extensions: 25715
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25691
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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