Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306C03f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   0.94 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   1.6  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   3.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   5.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.7  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 414 CRLSTHHYWCSCLWSYEG 467
           C+  T HY C C + Y G
Sbjct: 76  CQDHTTHYTCHCPYGYTG 93


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/48 (22%), Positives = 24/48 (50%)
 Frame = +1

Query: 22  QVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 165
           + +FK       + +A+K +VV+DK K  + +  + + +   D  C +
Sbjct: 198 KTRFKTINNILENLWAKKLIVVKDKKKSRSDEQTIDICMRCHDQLCDM 245


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +2

Query: 176 GLKVTILCALLIHMSCHVMV*RLV*QIMLQHIQLVCY*HEDC 301
           G K  IL  +L  ++C VMV   +     + IQ+V Y + +C
Sbjct: 182 GNKPVILTVVLPLLACGVMVVTHITMAHFKIIQVVPYCYINC 223


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -2

Query: 304 EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNK 206
           E + +L ++ LNM Q +     SH  ++  VN+
Sbjct: 301 EQMNLLHSNDLNMHQQHHQQNMSHEELSAMVNR 333


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -1

Query: 488 LRPPSTAPFIAPKT 447
           L PP++ P ++PK+
Sbjct: 106 LTPPNSEPLVSPKS 119


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -2

Query: 304  EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 197
            +A  + IAD L ML   L       + + H++++R+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -2

Query: 304  EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 197
            +A  + IAD L ML   L       + + H++++R+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -2

Query: 304  EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 197
            +A  + IAD L ML   L       + + H++++R+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -2

Query: 304  EAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRT 197
            +A  + IAD L ML   L       + + H++++R+
Sbjct: 1131 KASLINIADSLEMLNKRLDHIEKTIDPSGHISRRRS 1166


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/33 (27%), Positives = 14/33 (42%)
 Frame = -2

Query: 283 ADQLNMLQHNLSDQPSHHNVATHVNKQRTQYGH 185
           A Q N      ++Q  HH+   H++ Q     H
Sbjct: 307 AQQQNNNNAATNNQNHHHHAGHHIHAQHHVVNH 339


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,296
Number of Sequences: 336
Number of extensions: 2634
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)