Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306C03f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   268   6e-74
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   3.6  
AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450 pr...    24   3.6  
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     23   4.7  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   8.2  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   8.2  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  268 bits (658), Expect = 6e-74
 Identities = 127/173 (73%), Positives = 137/173 (79%)
 Frame = +1

Query: 1   KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 180
           KQYFKRYQV+F+RRREGKTDYYARKRL+ QDKNKYNTPK+RLIVRLSN+D+TCQ+AY RI
Sbjct: 10  KQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDITCQIAYRRI 69

Query: 181 EGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXE 360
           EGD IVCAAYSHELPRYGVKVGLTNYAAAY TG                          E
Sbjct: 70  EGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYAGCTDVTGEE 129

Query: 361 YNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVSSXSIKRFP 519
           Y VEPVD GP AFRCYLDVGLARTTTG+RVFGAMKGAVDGGLN+   S+KRFP
Sbjct: 130 YLVEPVDEGPAAFRCYLDVGLARTTTGSRVFGAMKGAVDGGLNI-PHSVKRFP 181


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 481 HRQQHPS*LQRHEH 440
           H+QQHP   Q H H
Sbjct: 173 HQQQHPGHSQHHHH 186


>AY028785-1|AAK32959.1|  509|Anopheles gambiae cytochrome P450
           protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 317 LTPYTLAQQMSQVMNTMLNLSTMDQEHL 400
           LTP   + +M Q+  TML ++T    HL
Sbjct: 137 LTPTFTSGRMKQMFGTMLQVATELHRHL 164


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 211 NKQRTQYGHLQSESRPPGML 152
           +KQ  +Y H   E +PPG L
Sbjct: 152 SKQALKYYHYYLEGQPPGQL 171


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 84  CSGQEQI*HT*ISSDCASLQQRCNMP 161
           C G   I H    S+CA   QRC+ P
Sbjct: 553 CGGAHHIGH----SECARSAQRCSRP 574


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +1

Query: 13  KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYR 123
           KR+ V   R   GK++++   + V+ D+  +  P+ R
Sbjct: 25  KRHNVVVGRNGSGKSNFFYAIQFVLSDEFTHLRPEQR 61


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 540,052
Number of Sequences: 2352
Number of extensions: 11097
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)