Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306C03f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical pr...   213   6e-56
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    30   1.2  
AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical ...    29   2.0  
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z93390-6|CAB07675.4|  816|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z93390-1|CAE46674.1|  540|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z80214-7|CAC42261.2|  816|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z66524-6|CAA91418.2|  408|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF022969-1|AAB69894.3|  391|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z49967-5|CAA90251.1|  293|Caenorhabditis elegans Hypothetical
           protein F54C9.5 protein.
          Length = 293

 Score =  213 bits (520), Expect = 6e-56
 Identities = 101/164 (61%), Positives = 118/164 (71%)
 Frame = +1

Query: 1   KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 180
           K YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV  Q+AYS+I
Sbjct: 10  KAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDVVAQLAYSKI 69

Query: 181 EGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXE 360
           EGD +V +AYSHELPRYG+KVGLTNYAAAY+TG                          +
Sbjct: 70  EGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYKGHEELTGED 129

Query: 361 YNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNV 492
           YNVE  +     F+  LD+GLARTTTG+++F  MKG  DGG+NV
Sbjct: 130 YNVEE-EGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINV 172


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -2

Query: 208  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 95
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -2

Query: 208  KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 95
            +QR     ++ + + P   HLC R+++  DI  CYI CS
Sbjct: 980  RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018


>AF067610-1|AAC17538.2|  696|Caenorhabditis elegans Hypothetical
           protein F41A4.1 protein.
          Length = 696

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +1

Query: 364 NVEPVDNGPGAFRCYL-DVGLARTTTGARVFGAMKGAVDGGLNVSSXSIKRFP 519
           N EP++   G F C+L       TT+G+R  G  K  ++      S + ++FP
Sbjct: 68  NAEPIEKKNGGFNCHLHSKSPVLTTSGSRTVGT-KTCLENKCLKRSFAFEKFP 119


>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
           protein K10G4.5 protein.
          Length = 1251

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +1

Query: 103 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 222
           YN P+YR +++L  K   C+     + GD++   +CA +  EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588


>Z93390-6|CAB07675.4|  816|Caenorhabditis elegans Hypothetical
           protein T23B5.3a protein.
          Length = 816

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 250 SDQPSHHNVATHVNKQRTQYGHLQSESRP 164
           SD P HH   +H + Q  Q  HLQ    P
Sbjct: 17  SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45


>Z93390-1|CAE46674.1|  540|Caenorhabditis elegans Hypothetical
           protein T23B5.3b protein.
          Length = 540

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 250 SDQPSHHNVATHVNKQRTQYGHLQSESRP 164
           SD P HH   +H + Q  Q  HLQ    P
Sbjct: 17  SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45


>Z80214-7|CAC42261.2|  816|Caenorhabditis elegans Hypothetical
           protein T23B5.3a protein.
          Length = 816

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 250 SDQPSHHNVATHVNKQRTQYGHLQSESRP 164
           SD P HH   +H + Q  Q  HLQ    P
Sbjct: 17  SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45


>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical
           protein F55H12.3 protein.
          Length = 2972

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 521 PGNLLMEXEETLRPPSTAPFIAPKTRAP 438
           PG +L E E     P+T P I P T +P
Sbjct: 627 PGRILDESEIDQEQPTTDPIITPTTSSP 654


>Z66524-6|CAA91418.2|  408|Caenorhabditis elegans Hypothetical
           protein T13H5.2 protein.
          Length = 408

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/69 (20%), Positives = 31/69 (44%)
 Frame = -2

Query: 250 SDQPSHHNVATHVNKQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYICSCPEQRGVY 71
           +D P+      +V+ + T +  +  E   PG     W   +++DI    + +   +  V 
Sbjct: 291 NDLPAEKLTKLNVSARSTTFVPITLEGNVPGRKLYWWWRLENNDINFSILRAAEGEEKVA 350

Query: 70  EHNNQFSLH 44
           EH++ + +H
Sbjct: 351 EHDDDYMVH 359


>AF022969-1|AAB69894.3|  391|Caenorhabditis elegans Hypothetical
           protein C29G2.5 protein.
          Length = 391

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 94  KNKYNTPKYRLIVRLSNKDVTCQVAYSRIEG 186
           K+K  TP YRL++ L + D+T  V  S I G
Sbjct: 187 KSKSRTPTYRLMLILGSLDLTGLVISSLIPG 217


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,685,001
Number of Sequences: 27780
Number of extensions: 237930
Number of successful extensions: 655
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)