Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306B12f
         (513 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   0.65 
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   1.1  
AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.        25   2.0  
AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.        25   2.0  
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       23   4.6  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   4.6  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          23   6.1  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 0.65
 Identities = 14/53 (26%), Positives = 29/53 (54%)
 Frame = -1

Query: 462 QSSLRRRMEQKHRVLRYKEQKHRVLRCKEQKPQYTAMLHKELRSERM*EQPEQ 304
           ++++ R  E++ R  R +EQ+ +  R KEQ+ +      +  + +R  EQ E+
Sbjct: 463 EAAIEREKERELREQREREQREKEQREKEQREKEERERQQREKEQREREQREK 515



 Score = 25.8 bits (54), Expect = 0.86
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = -1

Query: 450 RRRMEQKHRVLRYKEQKHRVLRCKEQKPQYTAMLHKELRSERM*EQPEQ 304
           +R  EQ+ +  R KE++ R  R KEQ+ +      +E  + R  E+  +
Sbjct: 482 QREKEQREKEQREKEERERQQREKEQREREQREKEREREAARERERERE 530



 Score = 25.0 bits (52), Expect = 1.5
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -1

Query: 450 RRRMEQKHRVLRYKEQKHRVLRCKEQKPQYTAMLHKELRSERM*EQPEQ 304
           R   EQ+ R  R KEQ+ +  R KE++ +      +  R +R  E+  +
Sbjct: 472 RELREQREREQREKEQREKEQREKEERERQQREKEQREREQREKERERE 520



 Score = 23.8 bits (49), Expect = 3.5
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -1

Query: 435 QKHRVLRYKEQKHRVLRCKEQKPQYTAMLHKELRSERM*EQPEQLQ 298
           +K R LR  EQ+ R  R KEQ+ +      +  R +R  EQ E+ Q
Sbjct: 469 EKERELR--EQREREQREKEQREKEQREKEERERQQREKEQREREQ 512


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
 Frame = -1

Query: 456 SLRRRMEQKHRVLRYKEQKHRVLRCKEQK-PQYTAMLHKELRSERM*EQPEQL--QLR-T 289
           ++RR+ E+  R L  KEQK + L  K+ +  Q+++   KE R + +  + + L  Q++  
Sbjct: 353 AMRRKEEECSRELNLKEQKRKELYAKQGRGSQFSS---KEERDKWIQGELKSLNKQIKDK 409

Query: 288 VLPLGLLVWQLERSCMKQGQLPKEQRQQLD 199
           +     L   L++   KQG+L K+ ++  +
Sbjct: 410 ISHQNKLQDDLKKDIAKQGELEKKIQEHTE 439


>AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 276 GLLVWQLERSCM 241
           G  +WQ+ERSCM
Sbjct: 75  GSKIWQMERSCM 86


>AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 276 GLLVWQLERSCM 241
           G  +WQ+ERSCM
Sbjct: 75  GSKIWQMERSCM 86


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 1   LQKCTKSYFSSPPSHWRQPNP 63
           L+   ++ F   P HWR  NP
Sbjct: 148 LKDLARTEFDRRPPHWRTSNP 168


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -2

Query: 293 VRCCRWGY*SGSW 255
           +R C WG+ S +W
Sbjct: 279 IRTCHWGFNSSNW 291


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 288 VLPLGLLVWQLERSCMKQG 232
           V  LGL++W++ R C   G
Sbjct: 255 VYALGLVLWEIARRCNVDG 273


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 366,353
Number of Sequences: 2352
Number of extensions: 5725
Number of successful extensions: 22
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)