Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306B12f
         (513 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF123655-1|AAD23836.1|  537|Homo sapiens FEZ1 protein.                 32   1.4  
AK126025-1|BAC86399.1|  804|Homo sapiens protein ( Homo sapiens ...    31   2.4  
L42542-1|AAB00103.1|  655|Homo sapiens RLIP76 protein protein.         30   4.1  
BC107139-1|AAI07140.1|  767|Homo sapiens patched domain containi...    30   4.1  
BC013126-1|AAH13126.1|  655|Homo sapiens ralA binding protein 1 ...    30   4.1  

>AF123655-1|AAD23836.1|  537|Homo sapiens FEZ1 protein.
          Length = 537

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
 Frame = -1

Query: 465 CQSSLRRR------MEQKHRVLRYKEQKHRVLRCKEQKPQ-YTAMLHKELRSERM*EQ 313
           C++ L+R+      + +KH  L +KE+K +V++ ++Q  Q Y AM  +  R E+  +Q
Sbjct: 450 CENELQRKKNEAELLREKHERLVWKEEKEKVIQYQKQLQQSYVAMYQRNQRLEKALQQ 507


>AK126025-1|BAC86399.1|  804|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44037 fis, clone TESTI4028823. ).
          Length = 804

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 353 IAVYCGFCSLHRSTLCFCSLYRSTLCFC 436
           +A+Y G  S  RS  CFC    +TL FC
Sbjct: 499 LALYTGIMSSFRSVQCFCIYTGTTLLFC 526


>L42542-1|AAB00103.1|  655|Homo sapiens RLIP76 protein protein.
          Length = 655

 Score = 30.3 bits (65), Expect = 4.1
 Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
 Frame = -1

Query: 438 EQKHRVLRYKEQKHRVLRCKEQKPQYTAMLHKELRSERM-*EQPE--QLQLRTVLPL-GL 271
           E+KH+  ++KE+KH+  + K+          KE + ++   ++PE  Q+ +  + P+ G+
Sbjct: 133 EEKHKEEKHKEEKHKEKKSKDLTAADVVKQWKEKKKKKKPIQEPEVPQIDVPNLKPIFGI 192

Query: 270 -LVWQLERSCMKQG-QLPKEQRQQLD 199
            L   +ER+ M  G +LP   R+ +D
Sbjct: 193 PLADAVERTMMYDGIRLPAVFRECID 218


>BC107139-1|AAI07140.1|  767|Homo sapiens patched domain containing
           3 protein.
          Length = 767

 Score = 30.3 bits (65), Expect = 4.1
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +2

Query: 353 IAVYCGFCSLHRSTLCFCSLYRSTLCFC 436
           +A+Y G  S  RS  CFC     TL FC
Sbjct: 499 LALYTGIMSSFRSVQCFCIYTGMTLLFC 526


>BC013126-1|AAH13126.1|  655|Homo sapiens ralA binding protein 1
           protein.
          Length = 655

 Score = 30.3 bits (65), Expect = 4.1
 Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
 Frame = -1

Query: 438 EQKHRVLRYKEQKHRVLRCKEQKPQYTAMLHKELRSERM-*EQPE--QLQLRTVLPL-GL 271
           E+KH+  ++KE+KH+  + K+          KE + ++   ++PE  Q+ +  + P+ G+
Sbjct: 133 EEKHKEEKHKEEKHKEKKSKDLTAADVVKQWKEKKKKKKPIQEPEVPQIDVPNLKPIFGI 192

Query: 270 -LVWQLERSCMKQG-QLPKEQRQQLD 199
            L   +ER+ M  G +LP   R+ +D
Sbjct: 193 PLADAVERTMMYDGIRLPAVFRECID 218


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,334,921
Number of Sequences: 237096
Number of extensions: 924939
Number of successful extensions: 6694
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6686
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)