Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306B11f
(521 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 26 0.18
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 26 0.23
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 26 0.23
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 2.9
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 2.9
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 21 6.6
DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory pro... 21 6.6
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 6.6
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 6.6
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 6.6
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 6.6
AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle pr... 21 6.6
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 26.2 bits (55), Expect = 0.18
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 267 HHAEFKLSLDSPQTSSSTGTCKLISARTTITKNDTTSS 380
HH + + DSP +S CKL S+ N +++S
Sbjct: 56 HHLQARPPQDSPYDASVAAACKLYSSEGQQNSNYSSNS 93
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 25.8 bits (54), Expect = 0.23
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -2
Query: 436 SVNYLALYDGYPPHHSPPRLEVVSFLVIVVRAEISLQVPVLLEVCGE 296
S++YL++ + PP PPR+E + V V L ++ + C E
Sbjct: 720 SISYLSMENNAPPPPPPPRVESFAETVRTVSKIPPLYKDLVAKRCEE 766
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 25.8 bits (54), Expect = 0.23
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +1
Query: 178 PQQASIAASTGPSQPTHRASWSYGTHIHCLITQNSSSVST 297
PQ A +ST S PT R S S T+ + + SSV T
Sbjct: 71 PQGAPSPSSTPSSLPTQRTSTSNPTYSSRSVMTSCSSVPT 110
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.2 bits (45), Expect = 2.9
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 130 HNPRILADKSKSSTVVPQQASIAAS-TGPSQPTHRASWSYG-THIHCLITQNSSSV 291
+NP I A + KS V Q+ SIA + ++P+ + + G + + + +N S V
Sbjct: 1407 NNPSISAFRKKSLAYVQQRMSIAPNRVSQARPSVQLRYPNGKANENFVFDENGSDV 1462
Score = 21.0 bits (42), Expect = 6.6
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1
Query: 172 VVPQQASIAASTGPSQPTHRASWSYG 249
V+P + A+S G P H +S+ G
Sbjct: 339 VLPGNYANASSVGSRNPIHTSSYMTG 364
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 22.2 bits (45), Expect = 2.9
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +1
Query: 130 HNPRILADKSKSSTVVPQQASIAAS-TGPSQPTHRASWSYG-THIHCLITQNSSSV 291
+NP I A + KS V Q+ SIA + ++P+ + + G + + + +N S V
Sbjct: 1407 NNPSISAFRKKSLAYVQQRMSIAPNRVSQARPSVQLRYPNGKANENFVFDENGSDV 1462
Score = 21.0 bits (42), Expect = 6.6
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1
Query: 172 VVPQQASIAASTGPSQPTHRASWSYG 249
V+P + A+S G P H +S+ G
Sbjct: 339 VLPGNYANASSVGSRNPIHTSSYMTG 364
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 154 KSKSSTVVPQQASIAASTGP 213
K K TVVP+ + + GP
Sbjct: 152 KCKPKTVVPEVGGVEEAKGP 171
>DQ855501-1|ABH88188.1| 146|Tribolium castaneum chemosensory
protein 15 protein.
Length = 146
Score = 21.0 bits (42), Expect = 6.6
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +3
Query: 243 LRHAHTLPHH 272
L+H H PHH
Sbjct: 127 LQHLHQFPHH 136
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.0 bits (42), Expect = 6.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 276 LRDEAVYVRAVGPGSAVS 223
+RD+A Y++ G G AV+
Sbjct: 947 VRDKAEYIKTKGFGGAVA 964
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.0 bits (42), Expect = 6.6
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -2
Query: 400 PHHSPPR 380
PHH PPR
Sbjct: 741 PHHQPPR 747
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.0 bits (42), Expect = 6.6
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -2
Query: 400 PHHSPPR 380
PHH PPR
Sbjct: 633 PHHQPPR 639
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.0 bits (42), Expect = 6.6
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +1
Query: 172 VVPQQASIAASTGPSQPTHRASWSYG 249
V+P + A+S G P H +S+ G
Sbjct: 106 VLPGNYANASSVGSRNPIHTSSYMTG 131
>AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle
protein.
Length = 361
Score = 21.0 bits (42), Expect = 6.6
Identities = 6/19 (31%), Positives = 10/19 (52%)
Frame = -2
Query: 67 GHQFGEVYDKGKIFHRASC 11
G+ G YD+ + +SC
Sbjct: 331 GYSMGSAYDQSSAYDASSC 349
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,509
Number of Sequences: 336
Number of extensions: 2797
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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