Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306B11f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47203| Best HMM Match : SASP_gamma (HMM E-Value=5.1) 31 0.58
SB_2507| Best HMM Match : DUF1168 (HMM E-Value=1.6) 31 0.58
SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_31780| Best HMM Match : Pkinase (HMM E-Value=0) 31 0.76
SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_29436| Best HMM Match : PAN (HMM E-Value=0.021) 30 1.3
SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_50786| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_20661| Best HMM Match : DUF1274 (HMM E-Value=8.7) 29 2.3
SB_20237| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_51630| Best HMM Match : Fz (HMM E-Value=3.3e-34) 29 3.1
SB_54310| Best HMM Match : Aa_trans (HMM E-Value=1.9e-23) 28 4.1
SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_28446| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37) 28 4.1
SB_17433| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_47843| Best HMM Match : zf-nanos (HMM E-Value=6.5) 28 4.1
SB_33627| Best HMM Match : SMC_hinge (HMM E-Value=0.75) 28 4.1
SB_26419| Best HMM Match : zf-nanos (HMM E-Value=6.5) 28 4.1
SB_25363| Best HMM Match : DUF866 (HMM E-Value=3.6) 28 4.1
SB_18151| Best HMM Match : zf-nanos (HMM E-Value=6.5) 28 4.1
SB_7636| Best HMM Match : zf-CCHC (HMM E-Value=6.6) 28 4.1
SB_56420| Best HMM Match : CUB (HMM E-Value=0.45) 28 5.4
SB_34718| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 27 7.1
SB_7934| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_1728| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 7.1
SB_54819| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3) 27 7.1
SB_56634| Best HMM Match : Pox_A32 (HMM E-Value=0.011) 27 9.4
SB_37753| Best HMM Match : zf-C2H2 (HMM E-Value=0.0023) 27 9.4
SB_32031| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_8286| Best HMM Match : AT_hook (HMM E-Value=0.98) 27 9.4
SB_2280| Best HMM Match : RVT_1 (HMM E-Value=1.4e-25) 27 9.4
>SB_47203| Best HMM Match : SASP_gamma (HMM E-Value=5.1)
Length = 225
Score = 31.1 bits (67), Expect = 0.58
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +2
Query: 146 SQTKASHRLSSHSKP-ASQPQQDHRSRLTALPGPTARTYTASSRRIQAQSRL 298
SQ A + ++ +KP A + QQ ++ TAL PT Y A+ R+Q+Q RL
Sbjct: 101 SQQSALTKPTALTKPTALKSQQSALTKPTALTKPTKCAYKANKVRLQSQLRL 152
Score = 28.7 bits (61), Expect = 3.1
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 113 SRTSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRRIQA-Q 289
++ +A T P KA+ ++ S+ Q QQ ++ TAL PT Y A+ R+Q+ Q
Sbjct: 126 TKPTALTKPTKCAYKAN-KVRLQSQLRLQSQQSALTKPTALTKPTKCAYKANKVRLQSQQ 184
Query: 290 SRLT 301
S LT
Sbjct: 185 SALT 188
>SB_2507| Best HMM Match : DUF1168 (HMM E-Value=1.6)
Length = 305
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 75 NLNTQPSDSSSAHQELRLPQSPHSRRQKQVIDCRPTASQHRSLNRTI 215
N + Q SD S H++ LP +PH +R K V+D T + H+ ++ I
Sbjct: 116 NPDIQDSDFSVVHEK-ELPPNPHEQRVKHVVD--TTQAYHQDNDKEI 159
>SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 75 NLNTQPSDSSSAHQELRLPQSPHSRRQKQVIDCRPTASQHRSLNRTI 215
N + Q SD S H++ LP +PH +R K V+D T + H+ ++ I
Sbjct: 76 NPDIQDSDFSVVHEK-ELPPNPHEQRVKHVVD--TTQAYHQDNDKEI 119
>SB_31780| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 964
Score = 30.7 bits (66), Expect = 0.76
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +1
Query: 82 TRNLLIHHQR--IKNFGYHNPRILADKSKSSTVVPQQASIAASTGPSQPTHRAS--WSYG 249
T+N+L++ +R +K + +IL+ KSK++TV+ I+ +P ++ S WS G
Sbjct: 131 TQNILLNKKRKVVKIGDFGISKILSSKSKANTVIGSPCYISPELCEGKPYNQKSDVWSLG 190
Query: 250 THIHCLIT 273
++ L T
Sbjct: 191 CVLYELTT 198
>SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 30.3 bits (65), Expect = 1.0
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 2/117 (1%)
Frame = +3
Query: 36 PLSYTSPNW*PRRNLNTQPSDSSSAHQELRLPQSPHSRRQKQVIDCRPTASQHR-SLNRT 212
PL+ + P PR+ +T PS + + R +P +RR+ V R ++ R + N+
Sbjct: 101 PLALSPPVSTPRQQRHTPPSFTPRSSISRRRSDTPKNRRRISVPRRRAGSALGRLTTNKK 160
Query: 213 IAADSPRFL-VLRHAHTLPHHAEFKLSLDSPQTSSSTGTCKLISARTTITKNDTTSS 380
L R A P + +SL SP SS G+ S +T T S
Sbjct: 161 TPPRRTNLLEAFRAAAGTPAGSSSSISLSSPGMRSSLGSIAPPSRTSTPRSRSTPRS 217
>SB_29436| Best HMM Match : PAN (HMM E-Value=0.021)
Length = 419
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/99 (19%), Positives = 40/99 (40%)
Frame = +3
Query: 84 TQPSDSSSAHQELRLPQSPHSRRQKQVIDCRPTASQHRSLNRTIAADSPRFLVLRHAHTL 263
T+P ++ A + +SP ++ + + + T + + T ++ +
Sbjct: 83 TKPQSTTKAPETQSTTESPETQSTTETPETQSTTESPETQSTTQTPETQSTTETPETQST 142
Query: 264 PHHAEFKLSLDSPQTSSSTGTCKLISARTTITKNDTTSS 380
E + + D+P+T S T T + S TT TT +
Sbjct: 143 TETPETQSTTDTPETQSPTQTPETQSTTTTPETQSTTDT 181
>SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1130
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -2
Query: 175 RQSMTCFCLRECGDCGSRSS*CADDESEGCVFKLR 71
RQ M FC + CG C + S+ C D E + F R
Sbjct: 626 RQVMEKFCRKTCGFCKAGSNACRDREPDERCFHWR 660
>SB_50786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = -2
Query: 166 MTCFCLRECGDCGSRSS*CADDE--SEGCVFKLR 71
M F L CGDCG +DE +GC KLR
Sbjct: 79 MQYFALLRCGDCGEFCLVLGEDEHNRKGCASKLR 112
>SB_20661| Best HMM Match : DUF1274 (HMM E-Value=8.7)
Length = 208
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 98 IRRLRVQITSGS-PVWGGIRQREDLPPSL 15
IRRLRVQIT+GS V G++Q L P+L
Sbjct: 1 IRRLRVQITTGSVSVSCGVKQGCKLAPTL 29
>SB_20237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 157 FCLRECGDCGSRSS*CADD--ESEGCVFKLRRGHQ 59
F L CGDCG DD +GC KLR +Q
Sbjct: 8 FALLRCGDCGEFCLVLGDDGHNRKGCASKLRLTYQ 42
>SB_51630| Best HMM Match : Fz (HMM E-Value=3.3e-34)
Length = 1120
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 116 RTSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTYT 262
R +A+T+P +Q+ ++ S PA+ +DH +R +A TY+
Sbjct: 290 RRTASTLPLSNQSSSTSTTPQPSSPATPSSRDHPTRGMLSTRESALTYS 338
>SB_54310| Best HMM Match : Aa_trans (HMM E-Value=1.9e-23)
Length = 977
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 157 FCLRECGDCGSRSS*CADDE--SEGCVFKLR 71
F L CGDCG +DE +GC KLR
Sbjct: 107 FALLRCGDCGEFCLVLGEDEHNRKGCASKLR 137
>SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1810
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2
Query: 173 SSHSKPASQPQQDHRSRLTALPGPTARTYTASSRRIQAQSR 295
S H + S+ H + T PGPT R+ SS RIQ SR
Sbjct: 1042 SKHDEVCSRATPQHANIDTKEPGPTGRSIDPSS-RIQEGSR 1081
>SB_28446| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 595
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 157 FCLRECGDCGSRSS*CADDE--SEGCVFKLR 71
F L CGDCG +DE +GC KLR
Sbjct: 107 FALLRCGDCGEFCLVLGEDEHNRKGCASKLR 137
>SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37)
Length = 1188
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 178 PQQASIAASTGPSQPTH 228
PQ AS+ S G SQPTH
Sbjct: 548 PQHASVGTSMGQSQPTH 564
>SB_17433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1924
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 157 FCLRECGDCGSRSS*CADDE--SEGCVFKLR 71
F L CGDCG +DE +GC KLR
Sbjct: 107 FALLRCGDCGEFCLVLGEDEHNRKGCASKLR 137
>SB_47843| Best HMM Match : zf-nanos (HMM E-Value=6.5)
Length = 251
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 157 FCLRECGDCGSRSS*CADDE--SEGCVFKLR 71
F L CGDCG +DE +GC KLR
Sbjct: 66 FALLRCGDCGEFCLVLGEDEHNRKGCASKLR 96
>SB_33627| Best HMM Match : SMC_hinge (HMM E-Value=0.75)
Length = 452
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 157 FCLRECGDCGSRSS*CADDE--SEGCVFKLR 71
F L CGDCG +DE +GC KLR
Sbjct: 324 FALLRCGDCGEFCLVLGEDEHNRKGCASKLR 354
>SB_26419| Best HMM Match : zf-nanos (HMM E-Value=6.5)
Length = 198
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 157 FCLRECGDCGSRSS*CADDE--SEGCVFKLR 71
F L CGDCG +DE +GC KLR
Sbjct: 107 FALLRCGDCGEFCLVLGEDEHNRKGCASKLR 137
>SB_25363| Best HMM Match : DUF866 (HMM E-Value=3.6)
Length = 463
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 157 FCLRECGDCGSRSS*CADDE--SEGCVFKLR 71
F L CGDCG +DE +GC KLR
Sbjct: 107 FALLRCGDCGEFCLVLGEDEHNRKGCASKLR 137
>SB_18151| Best HMM Match : zf-nanos (HMM E-Value=6.5)
Length = 271
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 157 FCLRECGDCGSRSS*CADDE--SEGCVFKLR 71
F L CGDCG +DE +GC KLR
Sbjct: 107 FALLRCGDCGEFCLVLGEDEHNRKGCASKLR 137
>SB_7636| Best HMM Match : zf-CCHC (HMM E-Value=6.6)
Length = 349
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -2
Query: 157 FCLRECGDCGSRSS*CADDE--SEGCVFKLR 71
F L CGDCG +DE +GC KLR
Sbjct: 107 FALLRCGDCGEFCLVLGEDEHNRKGCASKLR 137
>SB_56420| Best HMM Match : CUB (HMM E-Value=0.45)
Length = 1017
Score = 27.9 bits (59), Expect = 5.4
Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
Frame = +2
Query: 92 F*FIISASRTSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTYTASS 271
F FI +A +T+A+ P QT AS + AS ++ + P P T +
Sbjct: 539 FDFISTAPQTTASAFPTPPQTTASASPTPPQTTASVSPTSPQTTASVSPTPPQTTASEEQ 598
Query: 272 RRIQAQSRLTADFEQHWH--LQANLSTDND 355
+ + + WH L +S ND
Sbjct: 599 QEEKLTLAVNGCLSYDWHVTLYQAISKGND 628
>SB_34718| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 39 LSYTSPNW*PRRNLNTQPSDSSSAHQELRLP 131
L Y SP W + +LN Q ++ H +RLP
Sbjct: 129 LIYYSPFWTNKESLNPQAANDPYTHVNIRLP 159
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 104 ISASRTSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTYTASS 271
+S S T ATT + S TKA+ LS+ + A+ ++ T A T A++
Sbjct: 462 LSTSTTKATTTSSTSTTKATTTLSTSTTKATTTPSTSTTKATTSTAVEATTSPAAT 517
>SB_7934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 214 SQPTHRASWSYGTHIHCLITQNSSSVSTH 300
S T S+S TH HC + Q S S STH
Sbjct: 64 SHGTVAQSYSPSTHFHCTVAQ-SYSTSTH 91
>SB_1728| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 935
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 116 RTSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTAR 253
R +++ +P T+ HR+S +S Q ++ R T+ GP +R
Sbjct: 437 RPASSPLPQSQSTQVCHRVSVIQYHSSSLQVSNQERRTSASGPKSR 482
>SB_54819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +3
Query: 93 SDSSSAHQELRLPQSPHSRRQKQV-IDCRPTASQHRSLN--RTIAADSPRFLVLRHAHTL 263
S SSS H ++ + +SP S + + I P+ HR + R+ ++D R + + + +
Sbjct: 43 SPSSSHHPQITIVRSPSSYHHRHITIVISPSIYHHRHITILRSPSSDHHRHITIDISPSS 102
Query: 264 PHHAEFKLSLDSPQT 308
HH + + SP +
Sbjct: 103 YHHRHMTIVI-SPSS 116
>SB_13369| Best HMM Match : UPF0005 (HMM E-Value=0.3)
Length = 509
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +3
Query: 105 SAHQELRLPQSPHSRRQKQVIDCR-PTASQHRSLNRTIAADSPRFLVLRHAHTLPHH 272
S H P+ + R + + C P S H L+R + ++ R + H + HH
Sbjct: 246 SRHHHCHRPRLSNHHRPSRHLHCHCPRLSNHHRLSRHLHSNRLRLSIHHHPSSRHHH 302
>SB_56634| Best HMM Match : Pox_A32 (HMM E-Value=0.011)
Length = 684
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +2
Query: 155 KASHRLSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRRIQAQSRLTADFEQ 316
+AS R + + + H+SR LPG AR + RR + SR F +
Sbjct: 476 RASRRACAPTMRQALASHTHQSRKATLPGRLARLLGSLGRRWRPHSRPRTAFRR 529
>SB_37753| Best HMM Match : zf-C2H2 (HMM E-Value=0.0023)
Length = 650
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Frame = +2
Query: 107 SASRTSATTIPAFSQ-----TKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTYTASS 271
S + +S TT+P+ SQ T H +SH + ++ QQ S+ A + T+SS
Sbjct: 399 SLALSSHTTLPSTSQQPSSSTSKQHASTSHQRASTSHQQASSSQQQASSVDSVTRATSSS 458
Query: 272 R 274
R
Sbjct: 459 R 459
>SB_32031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 48 TSPNW*PRRNLNTQPSDSSSAHQELRLPQSPHS 146
+SP+W N T+P D S A +P +PHS
Sbjct: 20 SSPHW--NINFKTEPVDDSYAEPIAVVPATPHS 50
>SB_8286| Best HMM Match : AT_hook (HMM E-Value=0.98)
Length = 506
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2
Query: 176 SHSKPASQPQQDHRSRLTALPGPTARTYTASSRRIQAQSRL 298
+ S+P S PQQ + + PGP+A T + + + +L
Sbjct: 179 ARSRPKSTPQQSQTLQCSPSPGPSACTLSVDRQLTERVEKL 219
>SB_2280| Best HMM Match : RVT_1 (HMM E-Value=1.4e-25)
Length = 1186
Score = 27.1 bits (57), Expect = 9.4
Identities = 22/89 (24%), Positives = 38/89 (42%)
Frame = +3
Query: 72 RNLNTQPSDSSSAHQELRLPQSPHSRRQKQVIDCRPTASQHRSLNRTIAADSPRFLVLRH 251
R NT P +++ P++ HSR KQV C + H +++ + +
Sbjct: 180 RGTNTIPVHATTHKSPSSHPKT-HSRENKQVQTCGNCGTSHNVTQKSLCPANG--TKCSN 236
Query: 252 AHTLPHHAEFKLSLDSPQTSSSTGTCKLI 338
H A+ +L + Q +SS GT L+
Sbjct: 237 CGKPNHWAKITQALVNIQVNSSNGTLPLL 265
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,164,024
Number of Sequences: 59808
Number of extensions: 387125
Number of successful extensions: 1472
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1465
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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