Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306B11f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031482-1|AAH31482.1|  989|Homo sapiens C10orf12 protein protein.     32   1.1  
BC024315-1|AAH24315.1| 1247|Homo sapiens chromosome 10 open read...    32   1.1  
AL442123-2|CAH70916.1| 1247|Homo sapiens chromosome 10 open read...    32   1.1  
AK023084-1|BAB14396.1|  914|Homo sapiens protein ( Homo sapiens ...    32   1.1  

>BC031482-1|AAH31482.1|  989|Homo sapiens C10orf12 protein protein.
          Length = 989

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = +3

Query: 72  RNLNTQPSDSSSAHQELRLPQSPHSRRQKQ 161
           R L  Q SDSSSA  E+++P++P ++R K+
Sbjct: 353 RCLRNQSSDSSSACLEIKVPKNPSAKRSKK 382


>BC024315-1|AAH24315.1| 1247|Homo sapiens chromosome 10 open reading
           frame 12 protein.
          Length = 1247

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = +3

Query: 72  RNLNTQPSDSSSAHQELRLPQSPHSRRQKQ 161
           R L  Q SDSSSA  E+++P++P ++R K+
Sbjct: 519 RCLRNQSSDSSSACLEIKVPKNPSAKRSKK 548


>AL442123-2|CAH70916.1| 1247|Homo sapiens chromosome 10 open reading
           frame 12 protein.
          Length = 1247

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = +3

Query: 72  RNLNTQPSDSSSAHQELRLPQSPHSRRQKQ 161
           R L  Q SDSSSA  E+++P++P ++R K+
Sbjct: 519 RCLRNQSSDSSSACLEIKVPKNPSAKRSKK 548


>AK023084-1|BAB14396.1|  914|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13022 fis, clone NT2RP3000753, weakly similar to
           NEUROFILAMENT TRIPLET H PROTEIN. ).
          Length = 914

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = +3

Query: 72  RNLNTQPSDSSSAHQELRLPQSPHSRRQKQ 161
           R L  Q SDSSSA  E+++P++P ++R K+
Sbjct: 186 RCLRNQSSDSSSACLEIKVPKNPSAKRSKK 215


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,523,135
Number of Sequences: 237096
Number of extensions: 1801647
Number of successful extensions: 5180
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5173
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)