BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306B11f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA... 30 1.7
U21123-1|AAA85120.1| 684|Drosophila melanogaster ena polypeptid... 30 2.2
AE013599-2829|AAM68439.1| 829|Drosophila melanogaster CG15112-P... 30 2.2
AE013599-2828|AAX52697.1| 684|Drosophila melanogaster CG15112-P... 30 2.2
AE013599-2827|AAM68438.2| 684|Drosophila melanogaster CG15112-P... 30 2.2
AE013599-2826|AAF57598.2| 684|Drosophila melanogaster CG15112-P... 30 2.2
AY373570-1|AAR20251.1| 2726|Drosophila melanogaster 309 kDa cent... 29 2.9
AY060337-1|AAL25376.1| 260|Drosophila melanogaster GH23604p pro... 29 2.9
AE014298-975|AAZ52508.1| 260|Drosophila melanogaster CG33692-PC... 29 2.9
AE014298-974|AAF46215.3| 260|Drosophila melanogaster CG33692-PB... 29 2.9
AE014298-973|AAN09190.1| 260|Drosophila melanogaster CG33692-PA... 29 2.9
AE014296-2465|AAZ83989.1| 2897|Drosophila melanogaster CG33957-P... 29 2.9
AE014134-312|ABI31282.1| 2347|Drosophila melanogaster CG7337-PC,... 29 2.9
BT022205-1|AAY51599.1| 924|Drosophila melanogaster IP01015p pro... 29 3.8
AF223065-1|AAF34688.1| 823|Drosophila melanogaster putative mic... 29 3.8
AE014297-2189|AAF55301.1| 925|Drosophila melanogaster CG10309-P... 29 3.8
AE014296-1986|AAS65029.1| 3135|Drosophila melanogaster CG18331-P... 29 3.8
AE014297-3102|AAS65192.1| 780|Drosophila melanogaster CG33334-P... 29 5.1
AY060652-1|AAL28200.1| 684|Drosophila melanogaster GH07976p pro... 28 6.7
AY058550-1|AAL13779.1| 560|Drosophila melanogaster LD24704p pro... 28 6.7
AE014298-331|AAF45722.1| 560|Drosophila melanogaster CG16903-PA... 28 6.7
AE013599-769|AAF59001.1| 684|Drosophila melanogaster CG8193-PA ... 28 6.7
X80070-1|CAA56376.1| 635|Drosophila melanogaster Su(var)3-9 pro... 28 8.8
BT004897-1|AAO47875.1| 856|Drosophila melanogaster LD13416p pro... 28 8.8
BT003253-1|AAO25010.1| 659|Drosophila melanogaster LD27491p pro... 28 8.8
AY084210-1|AAL89948.1| 831|Drosophila melanogaster SD08336p pro... 28 8.8
AJ290956-2|CAB93768.2| 635|Drosophila melanogaster histone-lysi... 28 8.8
AF323978-1|AAL55993.1| 973|Drosophila melanogaster split centra... 28 8.8
AE014297-1978|AAF55154.1| 635|Drosophila melanogaster CG6476-PA... 28 8.8
AE014296-93|AAN11442.1| 952|Drosophila melanogaster CG1228-PD, ... 28 8.8
AE014296-92|AAN11441.1| 952|Drosophila melanogaster CG1228-PC, ... 28 8.8
AE014296-91|AAF47380.2| 952|Drosophila melanogaster CG1228-PA, ... 28 8.8
AE014296-85|AAN11443.2| 856|Drosophila melanogaster CG1228-PB, ... 28 8.8
>AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA
protein.
Length = 1976
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +2
Query: 119 TSATTIPAFSQTKASHRLSSHSKPAS---QPQQDHRSRLTALPGPTARTYTASSRRIQAQ 289
TS+++ P+ ++ +H+L+ KPAS +P Q HR + G T T A ++I+ +
Sbjct: 219 TSSSSAPSTTEVVLTHQLAK--KPASVQRKPNQPHRVKKPNGNGTTQTTSQAGKQKIKRK 276
Query: 290 SRLTA 304
+ T+
Sbjct: 277 TTTTS 281
>U21123-1|AAA85120.1| 684|Drosophila melanogaster ena polypeptide
protein.
Length = 684
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 113 SRTSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTY 259
S+T+ IP T H +S + PA QPQQ + + G Y
Sbjct: 165 SQTNQNNIPQSPPTPQGHHRTSSAPPAPQPQQQQQQQQAQQMGQPGSHY 213
>AE013599-2829|AAM68439.1| 829|Drosophila melanogaster CG15112-PB,
isoform B protein.
Length = 829
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 113 SRTSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTY 259
S+T+ IP T H +S + PA QPQQ + + G Y
Sbjct: 310 SQTNQNNIPQSPPTPQGHHRTSSAPPAPQPQQQQQQQQAQQMGQPGSHY 358
>AE013599-2828|AAX52697.1| 684|Drosophila melanogaster CG15112-PE,
isoform E protein.
Length = 684
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 113 SRTSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTY 259
S+T+ IP T H +S + PA QPQQ + + G Y
Sbjct: 165 SQTNQNNIPQSPPTPQGHHRTSSAPPAPQPQQQQQQQQAQQMGQPGSHY 213
>AE013599-2827|AAM68438.2| 684|Drosophila melanogaster CG15112-PC,
isoform C protein.
Length = 684
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 113 SRTSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTY 259
S+T+ IP T H +S + PA QPQQ + + G Y
Sbjct: 165 SQTNQNNIPQSPPTPQGHHRTSSAPPAPQPQQQQQQQQAQQMGQPGSHY 213
>AE013599-2826|AAF57598.2| 684|Drosophila melanogaster CG15112-PA,
isoform A protein.
Length = 684
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 113 SRTSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTY 259
S+T+ IP T H +S + PA QPQQ + + G Y
Sbjct: 165 SQTNQNNIPQSPPTPQGHHRTSSAPPAPQPQQQQQQQQAQQMGQPGSHY 213
>AY373570-1|AAR20251.1| 2726|Drosophila melanogaster 309 kDa
centrosomal protein protein.
Length = 2726
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 209 DHRSRLTALPGPTARTYTASSRRIQAQSRLTADFEQHWHLQANLSTDND 355
++R+ L GPT Y SRR + ++LT +Q +++ L D D
Sbjct: 499 EYRTLQEELGGPTLDIYVEMSRRDELIAKLTDSLQQSLNVRDKLQVDAD 547
>AY060337-1|AAL25376.1| 260|Drosophila melanogaster GH23604p
protein.
Length = 260
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/97 (27%), Positives = 41/97 (42%)
Frame = +3
Query: 36 PLSYTSPNW*PRRNLNTQPSDSSSAHQELRLPQSPHSRRQKQVIDCRPTASQHRSLNRTI 215
P+ P W +R TQ + + HQ Q PH ++Q Q +P A+ +
Sbjct: 80 PMGNVMPEWEQQRQRRTQAAAPTPPHQP---QQHPHQQQQTQQQQQQPAAA------AAV 130
Query: 216 AADSPRFLVLRHAHTLPHHAEFKLSLDSPQTSSSTGT 326
AA R ++ R H++ LS S SSST +
Sbjct: 131 AAPPQRHIMHRR-HSVCAAGLASLSPASSTHSSSTAS 166
>AE014298-975|AAZ52508.1| 260|Drosophila melanogaster CG33692-PC,
isoform C protein.
Length = 260
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/97 (27%), Positives = 41/97 (42%)
Frame = +3
Query: 36 PLSYTSPNW*PRRNLNTQPSDSSSAHQELRLPQSPHSRRQKQVIDCRPTASQHRSLNRTI 215
P+ P W +R TQ + + HQ Q PH ++Q Q +P A+ +
Sbjct: 80 PMGNVMPEWEQQRQRRTQAAAPTPPHQP---QQHPHQQQQTQQQQQQPAAA------AAV 130
Query: 216 AADSPRFLVLRHAHTLPHHAEFKLSLDSPQTSSSTGT 326
AA R ++ R H++ LS S SSST +
Sbjct: 131 AAPPQRHIMHRR-HSVCAAGLASLSPASSTHSSSTAS 166
>AE014298-974|AAF46215.3| 260|Drosophila melanogaster CG33692-PB,
isoform B protein.
Length = 260
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/97 (27%), Positives = 41/97 (42%)
Frame = +3
Query: 36 PLSYTSPNW*PRRNLNTQPSDSSSAHQELRLPQSPHSRRQKQVIDCRPTASQHRSLNRTI 215
P+ P W +R TQ + + HQ Q PH ++Q Q +P A+ +
Sbjct: 80 PMGNVMPEWEQQRQRRTQAAAPTPPHQP---QQHPHQQQQTQQQQQQPAAA------AAV 130
Query: 216 AADSPRFLVLRHAHTLPHHAEFKLSLDSPQTSSSTGT 326
AA R ++ R H++ LS S SSST +
Sbjct: 131 AAPPQRHIMHRR-HSVCAAGLASLSPASSTHSSSTAS 166
>AE014298-973|AAN09190.1| 260|Drosophila melanogaster CG33692-PA,
isoform A protein.
Length = 260
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/97 (27%), Positives = 41/97 (42%)
Frame = +3
Query: 36 PLSYTSPNW*PRRNLNTQPSDSSSAHQELRLPQSPHSRRQKQVIDCRPTASQHRSLNRTI 215
P+ P W +R TQ + + HQ Q PH ++Q Q +P A+ +
Sbjct: 80 PMGNVMPEWEQQRQRRTQAAAPTPPHQP---QQHPHQQQQTQQQQQQPAAA------AAV 130
Query: 216 AADSPRFLVLRHAHTLPHHAEFKLSLDSPQTSSSTGT 326
AA R ++ R H++ LS S SSST +
Sbjct: 131 AAPPQRHIMHRR-HSVCAAGLASLSPASSTHSSSTAS 166
>AE014296-2465|AAZ83989.1| 2897|Drosophila melanogaster CG33957-PB,
isoform B protein.
Length = 2897
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 209 DHRSRLTALPGPTARTYTASSRRIQAQSRLTADFEQHWHLQANLSTDND 355
++R+ L GPT Y SRR + ++LT +Q +++ L D D
Sbjct: 670 EYRTLQEELGGPTLDIYVEMSRRDELIAKLTDSLQQSLNVRDKLQVDAD 718
>AE014134-312|ABI31282.1| 2347|Drosophila melanogaster CG7337-PC,
isoform C protein.
Length = 2347
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 81 NTQPSDSSSAHQELRLPQSPHSRRQKQVIDCRPTASQ 191
NTQ Q+ ++P+ PH + Q+Q P ASQ
Sbjct: 1217 NTQQQIQPPVQQQYQIPKEPHQQAQQQHQQYAPPASQ 1253
>BT022205-1|AAY51599.1| 924|Drosophila melanogaster IP01015p
protein.
Length = 924
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 146 SQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTYT-ASSRRIQAQSRLTADFEQHW 322
+ T RL + +KP Q +Q + L+A PTA + A+ +R+ + + +T +Q
Sbjct: 528 TSTNEFKRLITQTKPQPQVKQQQTAGLSASGAPTATSANQAAMQRLSSNTTITKVPKQPA 587
Query: 323 HLQANLSTDN 352
L A T N
Sbjct: 588 SLPAPAPTSN 597
>AF223065-1|AAF34688.1| 823|Drosophila melanogaster putative
microtubule severingprotein katanin p80 subunit protein.
Length = 823
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/69 (21%), Positives = 30/69 (43%)
Frame = +2
Query: 122 SATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRRIQAQSRLT 301
++T +F++ RLS +Q Q++H + L P + R ++ RL+
Sbjct: 322 NSTNRKSFTRGNQKFRLSVGGAKPAQVQEEHEGDKSGLSSPNYSLEVVNERLLEVAGRLS 381
Query: 302 ADFEQHWHL 328
+ + HL
Sbjct: 382 SKWSSGCHL 390
>AE014297-2189|AAF55301.1| 925|Drosophila melanogaster CG10309-PA
protein.
Length = 925
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 146 SQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTYT-ASSRRIQAQSRLTADFEQHW 322
+ T RL + +KP Q +Q + L+A PTA + A+ +R+ + + +T +Q
Sbjct: 529 TSTNEFKRLITQTKPQPQVKQQQTAGLSASGAPTATSANQAAMQRLSSNTTITKVPKQPA 588
Query: 323 HLQANLSTDN 352
L A T N
Sbjct: 589 SLPAPAPTSN 598
>AE014296-1986|AAS65029.1| 3135|Drosophila melanogaster CG18331-PA
protein.
Length = 3135
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +3
Query: 303 QTSSSTGTCKLISARTTITKNDTTSSLGGE 392
Q SSSTG + TT T TTSS GGE
Sbjct: 1011 QGSSSTGDGNSTQSSTTTTTTTTTSSDGGE 1040
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 291 LDSPQTSSSTGTCKLISARTTITKNDTTSSLGGE 392
+D Q SSS G + TT T TTSS GGE
Sbjct: 127 VDVTQGSSSNGDGNSTQSSTTTTTTTTTSSDGGE 160
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 291 LDSPQTSSSTGTCKLISARTTITKNDTTSSLGGE 392
+D Q SSS G + TT T TTSS GGE
Sbjct: 1807 VDISQGSSSNGDGNSTQSSTTTTTTTTTSSDGGE 1840
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 291 LDSPQTSSSTGTCKLISARTTITKNDTTSSLGGE 392
+D Q SSS G + TT T TTSS GGE
Sbjct: 1887 VDISQGSSSNGDGNSTQSSTTTTTTTTTSSDGGE 1920
>AE014297-3102|AAS65192.1| 780|Drosophila melanogaster CG33334-PA
protein.
Length = 780
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 75 NLNTQPSDSSSAHQELRLPQSPHSRRQKQVIDCRPTASQHRSLNRTI 215
NL++ +DS QEL PQ+ + Q+Q P +S H + N+ +
Sbjct: 572 NLSSSYADSGIGEQELNAPQT--QQHQQQPPQPPPRSSSHMATNQNV 616
>AY060652-1|AAL28200.1| 684|Drosophila melanogaster GH07976p
protein.
Length = 684
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +2
Query: 20 SVEDLPFV-VYLPKLVTPT*FEHATF*FIISASRTSATTIPAFSQTKASHRLSSHSKPAS 196
SV+DL V VY V P F +A ++ T +P+FSQT + S
Sbjct: 104 SVDDLQSVAVYARDRVNPVLFNYALSVALLHRPDTQGLDLPSFSQTFPDRFIDSQVIRKM 163
Query: 197 QPQQDHRSRLTALPGPTARTYTAS 268
+ + + +P R YTAS
Sbjct: 164 REESFVVQPGSRMPITIPRDYTAS 187
>AY058550-1|AAL13779.1| 560|Drosophila melanogaster LD24704p
protein.
Length = 560
Score = 28.3 bits (60), Expect = 6.7
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 113 SRTSATTIPAFSQTKASHR-LSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRRIQAQ 289
SR+ + P+ +TK +HR SS S+ S P+ +SR + PT S R
Sbjct: 410 SRSPRSRSPSRERTKKTHRSRSSRSRSRSPPKHKKKSRHYS-RSPTRSNSPHSKHRKSKS 468
Query: 290 SRLTADFEQHWHLQANLSTDND 355
SR +++ N + N+
Sbjct: 469 SRERSEYYSKKDRSGNPGSSNN 490
>AE014298-331|AAF45722.1| 560|Drosophila melanogaster CG16903-PA
protein.
Length = 560
Score = 28.3 bits (60), Expect = 6.7
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 113 SRTSATTIPAFSQTKASHR-LSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRRIQAQ 289
SR+ + P+ +TK +HR SS S+ S P+ +SR + PT S R
Sbjct: 410 SRSPRSRSPSRERTKKTHRSRSSRSRSRSPPKHKKKSRHYS-RSPTRSNSPHSKHRKSKS 468
Query: 290 SRLTADFEQHWHLQANLSTDND 355
SR +++ N + N+
Sbjct: 469 SRERSEYYSKKDRSGNPGSSNN 490
>AE013599-769|AAF59001.1| 684|Drosophila melanogaster CG8193-PA
protein.
Length = 684
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +2
Query: 20 SVEDLPFV-VYLPKLVTPT*FEHATF*FIISASRTSATTIPAFSQTKASHRLSSHSKPAS 196
SV+DL V VY V P F +A ++ T +P+FSQT + S
Sbjct: 104 SVDDLQSVAVYARDRVNPVLFNYALSVALLHRPDTQGLDLPSFSQTFPDRFIDSQVIRKM 163
Query: 197 QPQQDHRSRLTALPGPTARTYTAS 268
+ + + +P R YTAS
Sbjct: 164 REESFVVQPGSRMPITIPRDYTAS 187
>X80070-1|CAA56376.1| 635|Drosophila melanogaster Su(var)3-9
protein.
Length = 635
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 240 VLRHAHTLPHHAEFKLSLDSPQTSSSTGTCKLISARTTITKNDTTS 377
+LRH L H+ F+ P +SS + + RTT TS
Sbjct: 108 MLRHLAELRRHSRFRRLCTKPASSSMPASTSSVDRRTTRRSTSQTS 153
>BT004897-1|AAO47875.1| 856|Drosophila melanogaster LD13416p
protein.
Length = 856
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 396 ITPLRDWRSCHF*LSLSVLRLACKCQCCSKSAVSRD*A*ILRDE 265
+ +RD R+C ++S R C+C C + +SR A I DE
Sbjct: 813 VRTMRDQRACMV-QNVSQYRFVCECICAAYMKISRSSAAINDDE 855
>BT003253-1|AAO25010.1| 659|Drosophila melanogaster LD27491p
protein.
Length = 659
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 396 ITPLRDWRSCHF*LSLSVLRLACKCQCCSKSAVSRD*A*ILRDE 265
+ +RD R+C ++S R C+C C + +SR A I DE
Sbjct: 616 VRTMRDQRACMV-QNVSQYRFVCECICAAYMKISRSSAAINDDE 658
>AY084210-1|AAL89948.1| 831|Drosophila melanogaster SD08336p
protein.
Length = 831
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Frame = +2
Query: 113 SRTSATTIPAFSQTKASHRLSSHSK----PASQPQQDHRSRLTALP----GPTARTYTAS 268
S+T+ IP T H +S + PA QPQQ +++ P GPT T++
Sbjct: 310 SQTNQNNIPQSPPTPQGHHRTSRNSLSAPPAPQPQQQQQAQQMGQPGSHYGPTGNGPTSN 369
Query: 269 SRRIQAQSRL 298
Q S++
Sbjct: 370 GLPQQVNSQI 379
>AJ290956-2|CAB93768.2| 635|Drosophila melanogaster histone-lysine
N-methyltransferase,H3 lysine-9 specific protein.
Length = 635
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 240 VLRHAHTLPHHAEFKLSLDSPQTSSSTGTCKLISARTTITKNDTTS 377
+LRH L H+ F+ P +SS + + RTT TS
Sbjct: 108 MLRHLAELRRHSRFRRLCTKPASSSMPASTSSVDRRTTRRSTSQTS 153
>AF323978-1|AAL55993.1| 973|Drosophila melanogaster split central
complex protein.
Length = 973
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 396 ITPLRDWRSCHF*LSLSVLRLACKCQCCSKSAVSRD*A*ILRDE 265
+ +RD R+C ++S R C+C C + +SR A I DE
Sbjct: 930 VRTMRDQRACMV-QNVSQYRFVCECICAAYMKISRSSAAINDDE 972
>AE014297-1978|AAF55154.1| 635|Drosophila melanogaster CG6476-PA,
isoform A protein.
Length = 635
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 240 VLRHAHTLPHHAEFKLSLDSPQTSSSTGTCKLISARTTITKNDTTS 377
+LRH L H+ F+ P +SS + + RTT TS
Sbjct: 108 MLRHLAELRRHSRFRRLCTKPASSSMPASTSSVDRRTTRRSTSQTS 153
>AE014296-93|AAN11442.1| 952|Drosophila melanogaster CG1228-PD,
isoform D protein.
Length = 952
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 396 ITPLRDWRSCHF*LSLSVLRLACKCQCCSKSAVSRD*A*ILRDE 265
+ +RD R+C ++S R C+C C + +SR A I DE
Sbjct: 909 VRTMRDQRACMV-QNVSQYRFVCECICAAYMKISRSSAAINDDE 951
>AE014296-92|AAN11441.1| 952|Drosophila melanogaster CG1228-PC,
isoform C protein.
Length = 952
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 396 ITPLRDWRSCHF*LSLSVLRLACKCQCCSKSAVSRD*A*ILRDE 265
+ +RD R+C ++S R C+C C + +SR A I DE
Sbjct: 909 VRTMRDQRACMV-QNVSQYRFVCECICAAYMKISRSSAAINDDE 951
>AE014296-91|AAF47380.2| 952|Drosophila melanogaster CG1228-PA,
isoform A protein.
Length = 952
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 396 ITPLRDWRSCHF*LSLSVLRLACKCQCCSKSAVSRD*A*ILRDE 265
+ +RD R+C ++S R C+C C + +SR A I DE
Sbjct: 909 VRTMRDQRACMV-QNVSQYRFVCECICAAYMKISRSSAAINDDE 951
>AE014296-85|AAN11443.2| 856|Drosophila melanogaster CG1228-PB,
isoform B protein.
Length = 856
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 396 ITPLRDWRSCHF*LSLSVLRLACKCQCCSKSAVSRD*A*ILRDE 265
+ +RD R+C ++S R C+C C + +SR A I DE
Sbjct: 813 VRTMRDQRACMV-QNVSQYRFVCECICAAYMKISRSSAAINDDE 855
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,367,125
Number of Sequences: 53049
Number of extensions: 595073
Number of successful extensions: 2849
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2848
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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