Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306B11f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46676-1|AAY86202.1| 184|Caenorhabditis elegans Hypothetical pr... 35 0.031
Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical p... 31 0.38
Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical p... 31 0.38
Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical p... 31 0.38
Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical pr... 31 0.38
Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical pr... 31 0.38
AF016657-14|AAB93663.3| 495|Caenorhabditis elegans Hypothetical... 29 1.5
Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical pr... 29 2.7
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 2.7
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 28 3.5
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 3.5
U53139-1|AAS80341.1| 90|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z81106-5|CAB03223.3| 432|Caenorhabditis elegans Hypothetical pr... 28 4.7
AL033536-12|CAD45609.2| 432|Caenorhabditis elegans Hypothetical... 28 4.7
AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical... 28 4.7
AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein. 28 4.7
AC024790-14|ABA61861.1| 417|Caenorhabditis elegans Hypothetical... 28 4.7
AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstrea... 28 4.7
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81491-12|CAI46569.1| 177|Caenorhabditis elegans Hypothetical p... 27 6.2
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z70311-2|CAA94374.1| 366|Caenorhabditis elegans Hypothetical pr... 27 6.2
U70852-9|ABB51183.1| 784|Caenorhabditis elegans Hypothetical pr... 27 6.2
U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL034365-4|CAA22262.1| 375|Caenorhabditis elegans Hypothetical ... 27 6.2
AL023811-1|CAA19422.2| 947|Caenorhabditis elegans Hypothetical ... 27 6.2
Z83113-8|CAB05549.1| 340|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81042-6|CAB02797.1| 340|Caenorhabditis elegans Hypothetical pr... 27 8.1
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 27 8.1
AC006790-9|AAF60735.1| 382|Caenorhabditis elegans Hypothetical ... 27 8.1
>U46676-1|AAY86202.1| 184|Caenorhabditis elegans Hypothetical
protein F23G4.1 protein.
Length = 184
Score = 35.1 bits (77), Expect = 0.031
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 299 TADFEQHWHLQANLSTDNDN*K*HDLQSRRGVMWRVAIIQRKIIDRCLNLAYDIFK--IK 472
T+ F HW + + N K HDL RG+M V I Q+ I DR Y +F +K
Sbjct: 27 TSLFTDHW-----VDVEVKNPKGHDLYLHRGLMQWVCINQKDISDRNCIAKYPLFPGWLK 81
Query: 473 RIYTC 487
++TC
Sbjct: 82 SVFTC 86
>Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 31.5 bits (68), Expect = 0.38
Identities = 22/77 (28%), Positives = 29/77 (37%)
Frame = +2
Query: 104 ISASRTSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRRIQ 283
+S+ R SA +P Q S+ SH K Q H P P + SS
Sbjct: 504 LSSHRESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLS---NGSSHGYA 560
Query: 284 AQSRLTADFEQHWHLQA 334
A S D + +HL A
Sbjct: 561 ASSTSGYDDDDIYHLSA 577
>Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 31.5 bits (68), Expect = 0.38
Identities = 22/77 (28%), Positives = 29/77 (37%)
Frame = +2
Query: 104 ISASRTSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRRIQ 283
+S+ R SA +P Q S+ SH K Q H P P + SS
Sbjct: 363 LSSHRESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLS---NGSSHGYA 419
Query: 284 AQSRLTADFEQHWHLQA 334
A S D + +HL A
Sbjct: 420 ASSTSGYDDDDIYHLSA 436
>Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical
protein C01F6.6e protein.
Length = 331
Score = 31.5 bits (68), Expect = 0.38
Identities = 22/77 (28%), Positives = 29/77 (37%)
Frame = +2
Query: 104 ISASRTSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRRIQ 283
+S+ R SA +P Q S+ SH K Q H P P + SS
Sbjct: 227 LSSHRESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLS---NGSSHGYA 283
Query: 284 AQSRLTADFEQHWHLQA 334
A S D + +HL A
Sbjct: 284 ASSTSGYDDDDIYHLSA 300
>Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 31.5 bits (68), Expect = 0.38
Identities = 22/77 (28%), Positives = 29/77 (37%)
Frame = +2
Query: 104 ISASRTSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRRIQ 283
+S+ R SA +P Q S+ SH K Q H P P + SS
Sbjct: 504 LSSHRESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLS---NGSSHGYA 560
Query: 284 AQSRLTADFEQHWHLQA 334
A S D + +HL A
Sbjct: 561 ASSTSGYDDDDIYHLSA 577
>Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 31.5 bits (68), Expect = 0.38
Identities = 22/77 (28%), Positives = 29/77 (37%)
Frame = +2
Query: 104 ISASRTSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRRIQ 283
+S+ R SA +P Q S+ SH K Q H P P + SS
Sbjct: 363 LSSHRESAVDVPVSHQYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLS---NGSSHGYA 419
Query: 284 AQSRLTADFEQHWHLQA 334
A S D + +HL A
Sbjct: 420 ASSTSGYDDDDIYHLSA 436
>AF016657-14|AAB93663.3| 495|Caenorhabditis elegans Hypothetical
protein C16C4.13 protein.
Length = 495
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 118 NFGYHNPRILADKSKSSTVVPQQASIAASTGPSQPTHRASW 240
+FG+H P + D++K+ VV ++A + A+ G + W
Sbjct: 188 SFGFHLPHVSEDRTKTG-VVEREAKLIAANGKFHSVPKRRW 227
>Z68882-5|CAD89726.1| 407|Caenorhabditis elegans Hypothetical
protein C47E12.4b protein.
Length = 407
Score = 28.7 bits (61), Expect = 2.7
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 10/90 (11%)
Frame = +2
Query: 104 ISASRTSATTIPAFSQTKASHRLSSHSKPASQPQQ---------DHRSRLTALPGPTART 256
+S+S +ATT + S T S S+P + Q D S LP P
Sbjct: 14 VSSSSNTATTSTSSSNTSQKWATSRTSRPVTNVTQVSAIHTTSMDSGSSTVQLPSPRGSL 73
Query: 257 YTA-SSRRIQAQSRLTADFEQHWHLQANLS 343
TA S+ AQ +++A+ E+ H + LS
Sbjct: 74 TTAVSTSSSGAQRQMSANSERSLHTRLPLS 103
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 157 SKSSTVVPQQASIAA-STGPSQPTHRASWSYGTHIHCLITQNSSSVST 297
S STVV AS AA ST PS +S S GT + ++Q+S++ ST
Sbjct: 1746 SAGSTVVSSTASPAASSTAPSSTGTMSSTSSGT-VGSTMSQSSTAAST 1792
Score = 28.3 bits (60), Expect = 3.5
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +2
Query: 98 FIISASRTSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRR 277
F ++ TS +T+P+ S SS S + P S LT+ P P++ T SS
Sbjct: 657 FSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSS---TQSS-- 711
Query: 278 IQAQSRLT 301
AQS LT
Sbjct: 712 -GAQSTLT 718
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 3.5
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +2
Query: 98 FIISASRTSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRR 277
F ++ TS +T+P+ S SS S + P S LT+ P P++ T SS
Sbjct: 450 FSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSS---TQSS-- 504
Query: 278 IQAQSRLT 301
AQS LT
Sbjct: 505 -GAQSTLT 511
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 28.3 bits (60), Expect = 3.5
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +2
Query: 98 FIISASRTSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRR 277
F ++ TS +T+P+ S SS S + P S LT+ P P++ T SS
Sbjct: 657 FSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSS---TQSS-- 711
Query: 278 IQAQSRLT 301
AQS LT
Sbjct: 712 -GAQSTLT 718
>U53139-1|AAS80341.1| 90|Caenorhabditis elegans Hypothetical
protein F18E3.11 protein.
Length = 90
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +1
Query: 157 SKSSTVVPQQASIAASTGPSQPTHRASWSYGTHIHCLITQNSSSVS 294
S SS Q S +ST P H + + G C IT+N+SS S
Sbjct: 25 SSSSISTTQVVSRKSSTSSDAPRHSLNITVGEAEMCQITRNNSSNS 70
>Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +3
Query: 96 DSSSAHQELRL---PQSPHSRRQKQVIDCRPTASQHRSLNRTIAADSPR 233
D S + +EL + PQ+P RR+ ++++ TA + R + A++ PR
Sbjct: 826 DLSDSREELSVAAGPQAPKKRRRGRMMEDPETARKRRKGRKLEASEDPR 874
>Z81106-5|CAB03223.3| 432|Caenorhabditis elegans Hypothetical
protein R06C1.6 protein.
Length = 432
Score = 27.9 bits (59), Expect = 4.7
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Frame = +3
Query: 36 PLSYTSPNW*PRRNL---NTQPSDSSSAHQELRLPQSPHSRRQKQVIDCRPTASQHRSLN 206
PLS S N +RN + P+ S ++ P P ++Q + P S H ++
Sbjct: 203 PLSKYSQNNQGQRNSPPNHGYPNMSPYMTSQMNSPMHPQLQQQNSLTSS-PPVSMHSPVS 261
Query: 207 RTIAADSPRFLVL-RHAHTLPHHAEF 281
+ + V+ H H LPHH F
Sbjct: 262 QDFKSTIINGHVMGAHHHHLPHHTRF 287
>AL033536-12|CAD45609.2| 432|Caenorhabditis elegans Hypothetical
protein R06C1.6 protein.
Length = 432
Score = 27.9 bits (59), Expect = 4.7
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Frame = +3
Query: 36 PLSYTSPNW*PRRNL---NTQPSDSSSAHQELRLPQSPHSRRQKQVIDCRPTASQHRSLN 206
PLS S N +RN + P+ S ++ P P ++Q + P S H ++
Sbjct: 203 PLSKYSQNNQGQRNSPPNHGYPNMSPYMTSQMNSPMHPQLQQQNSLTSS-PPVSMHSPVS 261
Query: 207 RTIAADSPRFLVL-RHAHTLPHHAEF 281
+ + V+ H H LPHH F
Sbjct: 262 QDFKSTIINGHVMGAHHHHLPHHTRF 287
>AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = +3
Query: 96 DSSSAHQELRL---PQSPHSRRQKQVIDCRPTASQHRSLNRTIAADSPR 233
D S + +EL + PQ+P RR+ ++++ TA + R + A++ PR
Sbjct: 826 DLSDSREELSVAAGPQAPKKRRRGRMMEDPETARKRRKGRKLEASEDPR 874
>AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein.
Length = 481
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 69 RRNLNTQPSDSSSAHQELRLPQSPHSRRQKQ 161
RR N + SSS+ SPHSRRQ++
Sbjct: 443 RRRTNRHDTSSSSSEDSDSPSDSPHSRRQRK 473
>AC024790-14|ABA61861.1| 417|Caenorhabditis elegans Hypothetical
protein Y47D7A.16 protein.
Length = 417
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 466 LENVVSEIQASVNYLALYDGYPPHHSPPRLEVVSFLVI 353
+ +++S IQ + NY D PH+ PPR V F +I
Sbjct: 153 IPSLLSLIQGTSNYWC-DDNKTPHYYPPRFSVSMFFLI 189
>AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstream,
human gene xe7related protein 7 protein.
Length = 495
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 69 RRNLNTQPSDSSSAHQELRLPQSPHSRRQKQ 161
RR N + SSS+ SPHSRRQ++
Sbjct: 443 RRRTNRHDTSSSSSEDSDSPSDSPHSRRQRK 473
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = +2
Query: 107 SASRTSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRRIQA 286
S +T+ PA T++S S H +PA + + T G + T TASS A
Sbjct: 59 SGLKTANLKHPARPSTESSTSSSHHRRPAQEMNGTSTATATGGGGTSGATTTASSGAPAA 118
Query: 287 QS 292
S
Sbjct: 119 SS 120
>Z81491-12|CAI46569.1| 177|Caenorhabditis elegans Hypothetical
protein D1086.10a protein.
Length = 177
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 288 SLDSPQTSSSTGTCKLISARTTITKNDTTSSLG 386
S DSP T+SST T ++ + T+ + TT++ G
Sbjct: 48 STDSPSTASSTATEQIFTPSTSEPTSTTTTAPG 80
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = +2
Query: 107 SASRTSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRRIQA 286
S +T+ PA T++S S H +PA + + T G + T TASS A
Sbjct: 59 SGLKTANLKHPARPSTESSTSSSHHRRPAQEMNGTSTATATGGGGTSGATTTASSGAPAA 118
Query: 287 QS 292
S
Sbjct: 119 SS 120
>Z70311-2|CAA94374.1| 366|Caenorhabditis elegans Hypothetical
protein T25B9.2 protein.
Length = 366
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 129 PQS-PHSRRQKQVIDCRPTASQHRSLNRTIAADSPRFLVL 245
PQS PHS + + D +P + +S+N+ + R+L L
Sbjct: 79 PQSEPHSTQPESSNDVKPPVAAPKSVNKEVTTGYKRYLFL 118
>U70852-9|ABB51183.1| 784|Caenorhabditis elegans Hypothetical
protein F45E4.7c protein.
Length = 784
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 181 VGRQSMTCFCLRECGDCGSRSS*CADDESEGC 86
+G +S R+C D R S C DDE E C
Sbjct: 142 IGAKSTNVCNTRQCIDIAFRLSSCIDDEIEPC 173
>U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical
protein F45E4.7a protein.
Length = 868
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 181 VGRQSMTCFCLRECGDCGSRSS*CADDESEGC 86
+G +S R+C D R S C DDE E C
Sbjct: 226 IGAKSTNVCNTRQCIDIAFRLSSCIDDEIEPC 257
>AL034365-4|CAA22262.1| 375|Caenorhabditis elegans Hypothetical
protein Y69E1A.4 protein.
Length = 375
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 129 PQS-PHSRRQKQVIDCRPTASQHRSLNRTIAADSPRFLVL 245
PQS PHS + + D +P + +S+N+ + R+L L
Sbjct: 111 PQSEPHSTQPESSNDVKPPVAAPKSVNKEVTTGYKRYLFL 150
>AL023811-1|CAA19422.2| 947|Caenorhabditis elegans Hypothetical
protein C51F7.1 protein.
Length = 947
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 119 TSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRL 226
TS TT + + T + SSH +P QP Q H +L
Sbjct: 875 TSTTTTSSATMTSSLITASSHQQPL-QPSQQHHQQL 909
>Z83113-8|CAB05549.1| 340|Caenorhabditis elegans Hypothetical
protein C27H6.8 protein.
Length = 340
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -2
Query: 508 VRMSLFGTCIYALYLENVVSEIQASVNYLALYDGYPPHHSPPRL 377
V S+ + LY E V I A N ++ YDG P +HS L
Sbjct: 109 VSSSMIDLFYHRLY-EQFVESIDAIDNGISQYDGVPRYHSSGNL 151
>Z81042-6|CAB02797.1| 340|Caenorhabditis elegans Hypothetical
protein C27H6.8 protein.
Length = 340
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -2
Query: 508 VRMSLFGTCIYALYLENVVSEIQASVNYLALYDGYPPHHSPPRL 377
V S+ + LY E V I A N ++ YDG P +HS L
Sbjct: 109 VSSSMIDLFYHRLY-EQFVESIDAIDNGISQYDGVPRYHSSGNL 151
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +2
Query: 107 SASRTSATTIPAFSQTKASHRLSSHSKPASQPQQDHRSRLTALPGPTARTYTASSRRIQA 286
S +T+ PA T++S S H +PA + T G + T TASS A
Sbjct: 59 SGLKTANLKHPARPSTESSTSSSHHQRPAQEMNGTSTPTATGGGGTSGATTTASSGAPAA 118
Query: 287 QS 292
S
Sbjct: 119 SS 120
>AC006790-9|AAF60735.1| 382|Caenorhabditis elegans Hypothetical
protein Y49F6B.9 protein.
Length = 382
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/87 (19%), Positives = 33/87 (37%)
Frame = +2
Query: 32 LPFVVYLPKLVTPT*FEHATF*FIISASRTSATTIPAFSQTKASHRLSSHSKPASQPQQD 211
+PF + ++ P H ++ R F H + P +P+ +
Sbjct: 292 VPFALGYTYIMVPKALVHDVVDYVQKKKRREVPIADTF-HVDGYHGATMSLAPPPEPEPE 350
Query: 212 HRSRLTALPGPTARTYTASSRRIQAQS 292
HR+ + PGP++ T + S + S
Sbjct: 351 HRNADGSAPGPSSVTSSDYSEDFSSSS 377
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,025,097
Number of Sequences: 27780
Number of extensions: 276903
Number of successful extensions: 1048
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -