Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306B11f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   3.3  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   5.8  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   7.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   7.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   7.7  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 133 NPRILADKSKSSTVVPQQASIAASTGPSQ 219
           NPRI +  S S++  P     AA+  PS+
Sbjct: 514 NPRIASAPSSSTSSSPPAKGAAAAGQPSK 542


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 149 QTKASHRLSSHSKPASQPQQDH 214
           ++ +S R  S S   SQP QDH
Sbjct: 36  RSPSSSRSPSPSLLTSQPHQDH 57



 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 3   RIRHEARWKI 32
           RI H+A WK+
Sbjct: 512 RIHHDAEWKV 521


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 3   RIRHEARWKI 32
           RI H+A WK+
Sbjct: 427 RIHHDAEWKV 436


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 3   RIRHEARWKI 32
           RI H+A WK+
Sbjct: 746 RIHHDAEWKV 755


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 186 SQHRSLNRTIAADSP 230
           S H SLN T+  D P
Sbjct: 255 SLHASLNHTLTKDQP 269


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,881
Number of Sequences: 438
Number of extensions: 3308
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)