Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306B10f
(521 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-12|CAD27934.1| 160|Anopheles gambiae putative MLC1 pro... 83 7e-18
DQ139954-1|ABA29475.1| 451|Anopheles gambiae protein O-fucosylt... 25 2.0
EF519384-1|ABP68493.1| 506|Anopheles gambiae LRIM1 protein. 24 2.7
EF519383-1|ABP68492.1| 506|Anopheles gambiae LRIM1 protein. 24 2.7
EF519382-1|ABP68491.1| 493|Anopheles gambiae LRIM1 protein. 24 2.7
EF519381-1|ABP68490.1| 506|Anopheles gambiae LRIM1 protein. 24 2.7
EF519380-1|ABP68489.1| 506|Anopheles gambiae LRIM1 protein. 24 2.7
EF519376-1|ABP68485.1| 506|Anopheles gambiae LRIM1 protein. 24 2.7
EF519375-1|ABP68484.1| 493|Anopheles gambiae LRIM1 protein. 24 2.7
EF519374-1|ABP68483.1| 506|Anopheles gambiae LRIM1 protein. 24 2.7
EF519373-1|ABP68482.1| 506|Anopheles gambiae LRIM1 protein. 24 2.7
EF519372-1|ABP68481.1| 506|Anopheles gambiae LRIM1 protein. 24 2.7
EF519371-1|ABP68480.1| 506|Anopheles gambiae LRIM1 protein. 24 2.7
EF519370-1|ABP68479.1| 452|Anopheles gambiae LRIM1 protein. 24 2.7
EF519369-1|ABP68478.1| 506|Anopheles gambiae LRIM1 protein. 24 2.7
EF519368-1|ABP68477.1| 506|Anopheles gambiae LRIM1 protein. 24 2.7
EF519367-1|ABP68476.1| 506|Anopheles gambiae LRIM1 protein. 24 2.7
EF519366-1|ABP68475.1| 506|Anopheles gambiae LRIM1 protein. 24 2.7
EF519365-1|ABP68474.1| 486|Anopheles gambiae LRIM1 protein. 24 2.7
EF519364-1|ABP68473.1| 496|Anopheles gambiae LRIM1 protein. 24 2.7
EF519363-1|ABP68472.1| 503|Anopheles gambiae LRIM1 protein. 24 2.7
EF519362-1|ABP68471.1| 506|Anopheles gambiae LRIM1 protein. 24 2.7
EF519361-1|ABP68470.1| 497|Anopheles gambiae LRIM1 protein. 24 2.7
EF519360-1|ABP68469.1| 499|Anopheles gambiae LRIM1 protein. 24 2.7
EF519359-1|ABP68468.1| 506|Anopheles gambiae LRIM1 protein. 24 2.7
EF519358-1|ABP68467.1| 497|Anopheles gambiae LRIM1 protein. 24 2.7
EF519357-1|ABP68466.1| 506|Anopheles gambiae LRIM1 protein. 24 2.7
EF519356-1|ABP68465.1| 500|Anopheles gambiae LRIM1 protein. 24 2.7
EF519355-1|ABP68464.1| 506|Anopheles gambiae LRIM1 protein. 24 2.7
EF519354-1|ABP68463.1| 506|Anopheles gambiae LRIM1 protein. 24 2.7
EF519353-1|ABP68462.1| 470|Anopheles gambiae LRIM1 protein. 24 2.7
EF519352-1|ABP68461.1| 448|Anopheles gambiae LRIM1 protein. 24 2.7
EF519351-1|ABP68460.1| 486|Anopheles gambiae LRIM1 protein. 24 2.7
EF519350-1|ABP68459.1| 421|Anopheles gambiae LRIM1 protein. 24 2.7
EF519349-1|ABP68458.1| 486|Anopheles gambiae LRIM1 protein. 24 2.7
EF519348-1|ABP68457.1| 503|Anopheles gambiae LRIM1 protein. 24 2.7
EF519347-1|ABP68456.1| 470|Anopheles gambiae LRIM1 protein. 24 2.7
AY344814-1|AAR03842.1| 286|Anopheles gambiae LRR Toll protein. 24 2.7
AY344813-1|AAR03841.1| 286|Anopheles gambiae LRR Toll protein. 24 2.7
AY344812-1|AAR03840.1| 286|Anopheles gambiae LRR Toll protein. 24 2.7
AY344811-1|AAR03839.1| 286|Anopheles gambiae LRR Toll protein. 24 2.7
AY344810-1|AAR03838.1| 286|Anopheles gambiae LRR Toll protein. 24 2.7
AY344809-1|AAR03837.1| 286|Anopheles gambiae LRR Toll protein. 24 2.7
AF316636-1|AAG45164.1| 221|Anopheles gambiae glutathione S-tran... 24 2.7
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 23 4.7
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 23 6.2
>AJ439353-12|CAD27934.1| 160|Anopheles gambiae putative MLC1
protein protein.
Length = 160
Score = 82.6 bits (195), Expect = 7e-18
Identities = 42/126 (33%), Positives = 73/126 (57%), Gaps = 1/126 (0%)
Frame = +2
Query: 146 QLAEFQEAFQLFDSRGDGKIHVAQIGDALRALGQNPTESDVKKCT-LHLKPDERISFEVF 322
++ + Q F ++D G G++ +G+ALRAL NPT + K + +++I FE F
Sbjct: 9 EIEKAQFVFSVYDWEGSGQMDAMDLGNALRALNLNPTIELIGKMGGTQKRGEKKIKFEEF 68
Query: 323 LPIYQAISKARSGDTANDFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEVEQLLQ 502
LPI+ + K + DF+E L+ +DK+ +G + AEL H L+ LGE+L D E++ +++
Sbjct: 69 LPIFSQVKKEKEQGCFEDFLECLKLYDKNEDGTMLLAELTHSLTALGERLDDVELDNVMK 128
Query: 503 GQEDSQ 520
D +
Sbjct: 129 DCMDPE 134
>DQ139954-1|ABA29475.1| 451|Anopheles gambiae protein
O-fucosyltransferase 2 protein.
Length = 451
Score = 24.6 bits (51), Expect = 2.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -2
Query: 364 VATACFRYGLVNWQKHLKRYPFIRFKMKS 278
VA+ C R N + +LKR+ +RF +S
Sbjct: 347 VASDCTRMEFYNLKNYLKRFRVVRFVPES 375
>EF519384-1|ABP68493.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519383-1|ABP68492.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519382-1|ABP68491.1| 493|Anopheles gambiae LRIM1 protein.
Length = 493
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519381-1|ABP68490.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519380-1|ABP68489.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519376-1|ABP68485.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519375-1|ABP68484.1| 493|Anopheles gambiae LRIM1 protein.
Length = 493
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519374-1|ABP68483.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519373-1|ABP68482.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519372-1|ABP68481.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519371-1|ABP68480.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519370-1|ABP68479.1| 452|Anopheles gambiae LRIM1 protein.
Length = 452
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 242 FSQNLEHFDLRGNGF 256
>EF519369-1|ABP68478.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519368-1|ABP68477.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519367-1|ABP68476.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519366-1|ABP68475.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519365-1|ABP68474.1| 486|Anopheles gambiae LRIM1 protein.
Length = 486
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519364-1|ABP68473.1| 496|Anopheles gambiae LRIM1 protein.
Length = 496
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519363-1|ABP68472.1| 503|Anopheles gambiae LRIM1 protein.
Length = 503
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519362-1|ABP68471.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519361-1|ABP68470.1| 497|Anopheles gambiae LRIM1 protein.
Length = 497
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519360-1|ABP68469.1| 499|Anopheles gambiae LRIM1 protein.
Length = 499
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519359-1|ABP68468.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519358-1|ABP68467.1| 497|Anopheles gambiae LRIM1 protein.
Length = 497
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519357-1|ABP68466.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519356-1|ABP68465.1| 500|Anopheles gambiae LRIM1 protein.
Length = 500
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519355-1|ABP68464.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519354-1|ABP68463.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519353-1|ABP68462.1| 470|Anopheles gambiae LRIM1 protein.
Length = 470
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519352-1|ABP68461.1| 448|Anopheles gambiae LRIM1 protein.
Length = 448
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519351-1|ABP68460.1| 486|Anopheles gambiae LRIM1 protein.
Length = 486
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519350-1|ABP68459.1| 421|Anopheles gambiae LRIM1 protein.
Length = 421
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519349-1|ABP68458.1| 486|Anopheles gambiae LRIM1 protein.
Length = 486
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519348-1|ABP68457.1| 503|Anopheles gambiae LRIM1 protein.
Length = 503
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>EF519347-1|ABP68456.1| 470|Anopheles gambiae LRIM1 protein.
Length = 470
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 257 FSQNLEHFDLRGNGF 271
>AY344814-1|AAR03842.1| 286|Anopheles gambiae LRR Toll protein.
Length = 286
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 182 FSQNLEHFDLRGNGF 196
>AY344813-1|AAR03841.1| 286|Anopheles gambiae LRR Toll protein.
Length = 286
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 182 FSQNLEHFDLRGNGF 196
>AY344812-1|AAR03840.1| 286|Anopheles gambiae LRR Toll protein.
Length = 286
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 182 FSQNLEHFDLRGNGF 196
>AY344811-1|AAR03839.1| 286|Anopheles gambiae LRR Toll protein.
Length = 286
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 182 FSQNLEHFDLRGNGF 196
>AY344810-1|AAR03838.1| 286|Anopheles gambiae LRR Toll protein.
Length = 286
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 182 FSQNLEHFDLRGNGF 196
>AY344809-1|AAR03837.1| 286|Anopheles gambiae LRR Toll protein.
Length = 286
Score = 24.2 bits (50), Expect = 2.7
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 377 FIEGLRHFDKDGNGF 421
F + L HFD GNGF
Sbjct: 182 FSQNLEHFDLRGNGF 196
>AF316636-1|AAG45164.1| 221|Anopheles gambiae glutathione
S-transferase E2 protein.
Length = 221
Score = 24.2 bits (50), Expect = 2.7
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 149 IDPLNIQPYYESTNEIEGNEIGIF 78
ID L PYYE N G ++G F
Sbjct: 187 IDRLKQLPYYEEANGGGGTDLGKF 210
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 23.4 bits (48), Expect = 4.7
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 339 PYRKHAVATLLMTLLRVCAILTKMAMGSSLLRNCDTCSL--LSERS 470
P ++ LL+ L +IL + ++NC +CS+ +S+RS
Sbjct: 313 PAQQDRFNVLLLILFLCVSILGTLITPELWMKNCKSCSISPVSDRS 358
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 23.0 bits (47), Expect = 6.2
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 379 KVISSVATACFRYGLVNWQKHL-KRYP 302
K+++SV+ + RY W K L KR P
Sbjct: 777 KLLASVSESVMRYAAPVWSKELQKREP 803
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 503,733
Number of Sequences: 2352
Number of extensions: 10498
Number of successful extensions: 71
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -