Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306B08f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VEB6 Cluster: CG7183-PA; n=2; Drosophila melanogaster...    37   0.32 
UniRef50_Q7PX62 Cluster: ENSANGP00000013855; n=2; Culicidae|Rep:...    36   0.43 
UniRef50_UPI00015B5019 Cluster: PREDICTED: similar to GA20163-PA...    35   0.98 
UniRef50_Q293U5 Cluster: GA20163-PA; n=1; Drosophila pseudoobscu...    35   0.98 
UniRef50_A2TP44 Cluster: Putative uncharacterized protein; n=1; ...    35   1.3  

>UniRef50_Q9VEB6 Cluster: CG7183-PA; n=2; Drosophila
           melanogaster|Rep: CG7183-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 568

 Score = 36.7 bits (81), Expect = 0.32
 Identities = 22/40 (55%), Positives = 25/40 (62%)
 Frame = +1

Query: 112 KKILFNKSMLFSLKAELLRKQEEVLVKKQMPQHKAENFKP 231
           K I  N S L SLKAELLRKQ EV V K   +  A +F+P
Sbjct: 6   KAISVNLSSLLSLKAELLRKQHEVRVAK-ATKASAADFRP 44


>UniRef50_Q7PX62 Cluster: ENSANGP00000013855; n=2; Culicidae|Rep:
           ENSANGP00000013855 - Anopheles gambiae str. PEST
          Length = 555

 Score = 36.3 bits (80), Expect = 0.43
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = +1

Query: 112 KKILFNKSMLFSLKAELLRKQEEV 183
           +KI  +KS L SLKAELLRKQEEV
Sbjct: 6   RKIEIDKSSLLSLKAELLRKQEEV 29


>UniRef50_UPI00015B5019 Cluster: PREDICTED: similar to GA20163-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA20163-PA - Nasonia vitripennis
          Length = 843

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 37/138 (26%), Positives = 52/138 (37%), Gaps = 3/138 (2%)
 Frame = +1

Query: 115 KILFNKSMLFSLKAELLRKQEEVLVKKQMPQHKAENFKPPP---VXXXXXXXXXXXXXXX 285
           KI  + S L  LKAELLRK+ EV   K   ++     +  P                   
Sbjct: 350 KINIHHSSLVGLKAELLRKKAEVEAAKAKFENVGPVNRSKPNERKTQEKQNKKQTEKDGK 409

Query: 286 NLKAVDVEELQASRKSXXXXXXXXXXYEHLTDNAGNSQLAGRFLVDFSXXXXXXXXXXXX 465
           N  + DVE+++A +KS          YE L  +  N  +   FLVDF             
Sbjct: 410 NNLSEDVEDVKALKKSKLMLQAKSRLYEKLAKSHNN--MNPNFLVDFEHKPDSSDHSEEE 467

Query: 466 IVENKSGDEQVVANDNDD 519
             +N   +E     D+DD
Sbjct: 468 NSKNNGVNENESDYDSDD 485


>UniRef50_Q293U5 Cluster: GA20163-PA; n=1; Drosophila
           pseudoobscura|Rep: GA20163-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 534

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 23/43 (53%), Positives = 24/43 (55%)
 Frame = +1

Query: 112 KKILFNKSMLFSLKAELLRKQEEVLVKKQMPQHKAENFKPPPV 240
           K I  N S L SLKAELLRKQ EV + K   Q  A   KP  V
Sbjct: 6   KAISVNLSSLLSLKAELLRKQHEVKLAK-AAQVSAVEHKPQKV 47


>UniRef50_A2TP44 Cluster: Putative uncharacterized protein; n=1;
           Dokdonia donghaensis MED134|Rep: Putative
           uncharacterized protein - Dokdonia donghaensis MED134
          Length = 313

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 16/38 (42%), Positives = 25/38 (65%)
 Frame = -1

Query: 227 LKFSALC*GICFFTRTSSCFLSSSAFRLNSIDLLNKIF 114
           LKFS +C GI F+T+T +  ++ S + +N  +LL  IF
Sbjct: 257 LKFSLVCIGIVFYTQTLNLLITLSDYFMNGDNLLGLIF 294


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 390,935,146
Number of Sequences: 1657284
Number of extensions: 5805710
Number of successful extensions: 13258
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13224
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)