Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306B08f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   3.8  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   6.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.7  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -1

Query: 287 FSLKDFLSDFSDLSVFTGGGLKF 219
           F LKD  SD  D     GGG K+
Sbjct: 95  FKLKDSSSDSEDERPRPGGGTKY 117


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = -1

Query: 287 FSLKDFLSDFSDLSVFTGGGLKFSALC*GICFFTRTSSCFLSSSAFRLNSIDLLNKI 117
           F+L + L+D +  S+     LK S+L  G C      + ++++S      I+ +NK+
Sbjct: 58  FALSELLTDLAT-SIL----LKVSSLLIGFCASIYVGTVWINTSINGTKFIEFINKL 109


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +3

Query: 24  LS*VKVIKIVDRYLLHMQQKIFKYGRSRS 110
           L+ +++I +V  Y+L++      YG S+S
Sbjct: 242 LAMLEIIIVVITYVLNLTDLFLVYGMSKS 270


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 62  VPIYYFDYFHL 30
           V IYYF Y HL
Sbjct: 256 VCIYYFYYMHL 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,538
Number of Sequences: 336
Number of extensions: 1703
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)