Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306B08f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016134-1|AAV37019.1|  568|Drosophila melanogaster GH11784p pro...    37   0.019
AE014297-2463|AAF55511.1|  568|Drosophila melanogaster CG7183-PA...    37   0.019
AY118451-1|AAM49820.1|  440|Drosophila melanogaster AT01479p pro...    29   3.8  

>BT016134-1|AAV37019.1|  568|Drosophila melanogaster GH11784p
           protein.
          Length = 568

 Score = 36.7 bits (81), Expect = 0.019
 Identities = 22/40 (55%), Positives = 25/40 (62%)
 Frame = +1

Query: 112 KKILFNKSMLFSLKAELLRKQEEVLVKKQMPQHKAENFKP 231
           K I  N S L SLKAELLRKQ EV V K   +  A +F+P
Sbjct: 6   KAISVNLSSLLSLKAELLRKQHEVRVAK-ATKASAADFRP 44


>AE014297-2463|AAF55511.1|  568|Drosophila melanogaster CG7183-PA
           protein.
          Length = 568

 Score = 36.7 bits (81), Expect = 0.019
 Identities = 22/40 (55%), Positives = 25/40 (62%)
 Frame = +1

Query: 112 KKILFNKSMLFSLKAELLRKQEEVLVKKQMPQHKAENFKP 231
           K I  N S L SLKAELLRKQ EV V K   +  A +F+P
Sbjct: 6   KAISVNLSSLLSLKAELLRKQHEVRVAK-ATKASAADFRP 44


>AY118451-1|AAM49820.1|  440|Drosophila melanogaster AT01479p
           protein.
          Length = 440

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +1

Query: 67  YTCNRKYL---NMEDQGAKKILFNKSMLFSLKAELLRKQEEVLVKKQMPQHKAENFKPPP 237
           Y C++K     N +D+  K +   K      +AE+ +K E  L K     HK E+ K PP
Sbjct: 383 YLCSKKSKECPNKDDEALKCLQLKKQRQARAEAEMKKKAE--LKKNNSLSHKKEDDKAPP 440


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,889,690
Number of Sequences: 53049
Number of extensions: 274001
Number of successful extensions: 634
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)