Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306B07f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   3.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.0  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   6.6  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   8.7  

>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 202 FVVCCMLVLVS 170
           FVVCC+L++ S
Sbjct: 5   FVVCCLLLMFS 15


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 408  FTYHYEVEKPKVPYKLVLHVEPY 476
            FT HY +EK     KLV+ +  Y
Sbjct: 2046 FTIHYWIEKGADRRKLVMGMPMY 2068


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 222 VRCSDKRLLCVVCWF 178
           VRC D+ L+ +V W+
Sbjct: 79  VRCQDQILIFLVNWY 93


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 412 VNYKINDNHCLVHGPYVLVGF 350
           VN+  N   CL + P++  GF
Sbjct: 320 VNHLSNIEDCLNYVPHISTGF 340


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,424
Number of Sequences: 336
Number of extensions: 2212
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)