Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306B04f
         (366 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    24   2.0  
AY994092-1|AAX86005.1|   57|Anopheles gambiae hyp3.5 precursor p...    23   3.6  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    22   8.3  

>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/23 (39%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
 Frame = -2

Query: 149 KFWI-HAKGGF-VPGLPWLFDTI 87
           +FW+     GF +  +PWLF+T+
Sbjct: 206 RFWLDQGVDGFRIDAVPWLFETV 228


>AY994092-1|AAX86005.1|   57|Anopheles gambiae hyp3.5 precursor
           protein.
          Length = 57

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 157 FLKNFGSMPRVDSCLVFLGF 98
           FLK  GS PR   C++ +GF
Sbjct: 2   FLK--GSFPRFQMCVMLIGF 19


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +3

Query: 36  AKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMD 140
           A S + TN+N +  ++RN +  P  +  E +   D
Sbjct: 199 AVSSSSTNNNTSNISNRNQVNLPLASPEEESEASD 233


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 343,211
Number of Sequences: 2352
Number of extensions: 5746
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27514560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)