Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306B03f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37033| Best HMM Match : Annexin (HMM E-Value=0) 107 7e-24
SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19) 95 4e-20
SB_47771| Best HMM Match : Annexin (HMM E-Value=0) 88 5e-18
SB_26806| Best HMM Match : Annexin (HMM E-Value=0) 73 2e-13
SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25) 60 1e-09
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 55 4e-08
SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_49312| Best HMM Match : Mucin (HMM E-Value=0.19) 31 0.76
SB_12472| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_23071| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_28559| Best HMM Match : Y_phosphatase (HMM E-Value=0) 29 2.3
SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11) 29 2.3
SB_25942| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_18204| Best HMM Match : Phage_integr_N (HMM E-Value=0.24) 29 3.1
SB_31195| Best HMM Match : PspA_IM30 (HMM E-Value=1) 28 4.1
SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08) 28 4.1
SB_26916| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_25237| Best HMM Match : Phage_integrase (HMM E-Value=0.2) 27 7.1
SB_52231| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_52045| Best HMM Match : DUF1605 (HMM E-Value=3.8e-14) 27 9.4
SB_48269| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_29561| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_37033| Best HMM Match : Annexin (HMM E-Value=0)
Length = 287
Score = 107 bits (256), Expect = 7e-24
Identities = 56/128 (43%), Positives = 77/128 (60%)
Frame = +3
Query: 138 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIV 317
TL A G D KA++ +LC R QR I+ +KT +G+DLI +LKSE+ G E+ ++
Sbjct: 92 TLDIASNKPGCDNKALMYLLCSRTNSQRQRISLEYKTMFGRDLIKDLKSEVGGYFEDTVI 151
Query: 318 ALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLK 497
ALMTP + A L A+ G+GTDE +IE+L T +N I I Y L+ + LE D+
Sbjct: 152 ALMTPPAEYDATLLRKAIKGLGTDEAVLIEVLTTRTNDEIIAIRNAYNTLFSRDLEKDIA 211
Query: 498 GDPSGHFK 521
GD SG FK
Sbjct: 212 GDTSGKFK 219
Score = 47.6 bits (108), Expect = 6e-06
Identities = 36/117 (30%), Positives = 58/117 (49%)
Frame = +3
Query: 141 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 320
LRKA+KG GTDE +I+VL R + + I + T + +DL ++ + +G + +++
Sbjct: 165 LRKAIKGLGTDEAVLIEVLTTRTNDEIIAIRNAYNTLFSRDLEKDIAGDTSGKFKKFLIS 224
Query: 321 LMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESD 491
L L + A E GTDE IL + S +R + F E GK +S+
Sbjct: 225 LCNAL--YKAGE-----GRWGTDESKFNSILASRSFDQLR--ATFNEYSKGKVEKSN 272
>SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19)
Length = 146
Score = 94.7 bits (225), Expect = 4e-20
Identities = 46/91 (50%), Positives = 63/91 (69%)
Frame = +3
Query: 168 TDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFY 347
T+E +I +L R QR+EI + +KT YGKDL+++LKSEL+GNLE ++A+M P +
Sbjct: 2 TNEAELIGILANRSNAQRVEIRKRYKTMYGKDLMNDLKSELSGNLEECLLAMMEPSVLYD 61
Query: 348 AKELHDAVSGIGTDEEAIIEILCTLSNYGIR 440
AK L + G GTDEE +I+ILCT SN G R
Sbjct: 62 AKCLRRGMRGAGTDEETLIDILCTRSNQGNR 92
Score = 35.1 bits (77), Expect = 0.035
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3
Query: 141 LRKAMKGFGTDEKAIIDVLCRR 206
LR+ M+G GTDE+ +ID+LC R
Sbjct: 65 LRRGMRGAGTDEETLIDILCTR 86
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 384 TDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDPSGHFK 521
T+E +I IL SN I Y+ +YGK L +DLK + SG+ +
Sbjct: 2 TNEAELIGILANRSNAQRVEIRKRYKTMYGKDLMNDLKSELSGNLE 47
>SB_47771| Best HMM Match : Annexin (HMM E-Value=0)
Length = 529
Score = 87.8 bits (208), Expect = 5e-18
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +3
Query: 141 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 320
L+KAMKGFG+DE+AII+VL + QRL IA++FK Y KDL++ELKSEL+G E+ IVA
Sbjct: 311 LKKAMKGFGSDEEAIIEVLQSCNLEQRLAIAQSFKQQYDKDLVNELKSELSGKFEDAIVA 370
Query: 321 LMTPLPHFYAKELHDAVSGIGTDEEAII 404
L+ P A LH A+ + I+
Sbjct: 371 LLLPPEQLDANALHGAMQAKRVSADEIV 398
Score = 53.6 bits (123), Expect = 9e-08
Identities = 29/100 (29%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Frame = +3
Query: 141 LRKAMKGFGTDEKAIIDVL-CRRGIVQRLE-IAETFKTNYGKDLISELKSELTGNLENVI 314
L+KA++ +D+K +V+ C +L+ +++ + Y KDL+ +L ++ ++ +
Sbjct: 52 LQKAIEK--SDKKTATEVIVCNASDEGKLKKLSDEYNKRYEKDLVEQLDGKVADDVHEAV 109
Query: 315 VALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYG 434
+L+ P + L+ A+ G+GT E +IE LCT SN G
Sbjct: 110 TSLLLPATQADVRSLYYAMKGLGTKEAQLIETLCTRSNTG 149
Score = 44.8 bits (101), Expect = 4e-05
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = +3
Query: 348 AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDPSGHFK 521
A++L A+ G G+DEEAIIE+L + + I+ ++Q Y K L ++LK + SG F+
Sbjct: 308 AEKLKKAMKGFGSDEEAIIEVLQSCNLEQRLAIAQSFKQQYDKDLVNELKSELSGKFE 365
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 138 TLRKAMKGFGTDEKAIIDVLCRR 206
+L AMKG GT E +I+ LC R
Sbjct: 123 SLYYAMKGLGTKEAQLIETLCTR 145
>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
Length = 829
Score = 72.5 bits (170), Expect = 2e-13
Identities = 33/99 (33%), Positives = 57/99 (57%)
Frame = +3
Query: 225 EIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAII 404
++ + + Y KDL+ +L ++ ++ + +L+ P + L+ A+ G+GT E +I
Sbjct: 477 KLNDEYNKRYKKDLVEQLDGKVAIDVHEAVTSLLLPATKADVRSLYYAMKGLGTKEAQLI 536
Query: 405 EILCTLSNYGIRTISAFYEQLYGKSLESDLKGDPSGHFK 521
EILCT SN I+ I Y + YG+SL D+K + SG F+
Sbjct: 537 EILCTRSNAEIQEIKQEYNKKYGRSLTDDMKSETSGDFE 575
Score = 62.1 bits (144), Expect = 3e-10
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 17/139 (12%)
Frame = +3
Query: 138 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIV 317
+L AMKG GT E +I++LC R + EI + + YG+ L ++KSE +G+ EN++
Sbjct: 520 SLYYAMKGLGTKEAQLIEILCTRSNAEIQEIKQEYNKKYGRSLTDDMKSETSGDFENLLE 579
Query: 318 ALM-------TPL-PHFYAKELHDAVS-GI---GTDEEAIIEILCTLSNYGIRTISAFYE 461
L+ T + K+ VS G+ GTDE+ I IL S+ ++ + A Y+
Sbjct: 580 TLLKGSRDESTDVNKELVTKDAAALVSAGVARWGTDEDQFITILSQRSSAHVQAVLAEYK 639
Query: 462 QLYG-----KSLESDLKGD 503
L G ++ ++KGD
Sbjct: 640 TLSGGVSLADTVRDEMKGD 658
Score = 34.3 bits (75), Expect = 0.062
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Frame = +3
Query: 171 DEKAIIDVLCRRGIVQRL--EIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHF 344
D+K I +++ + + ++ ++ + +K Y +DL L +L +L + A++ P
Sbjct: 17 DKKKIKELVMKAAVDKKKLKKLGDDYKKQYKQDLTDALDGKLEEDLHEAVAAMLLPGNEA 76
Query: 345 YAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDPSGHFK 521
A+ L+ A+ I + +E Y++ YG SLE D+K + SG F+
Sbjct: 77 DARTLYFAMKNIDSIKEE-------------------YQKKYGCSLEDDVKEETSGDFE 116
Score = 31.5 bits (68), Expect = 0.44
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +3
Query: 228 IAETFKTNYGKDLISELKSELTGNLENVIVALMT 329
I E ++ YG L ++K E +G+ E+++VALM+
Sbjct: 91 IKEEYQKKYGCSLEDDVKEETSGDFEDLLVALMS 124
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 162 FGTDEKAIIDVLCRRGIVQRLEIAETFKT-NYGKDLISELKSELTGNLENVIVALMT 329
+GTDE I +L +R + +KT + G L ++ E+ G+L + ++ L++
Sbjct: 612 WGTDEDQFITILSQRSSAHVQAVLAEYKTLSGGVSLADTVRDEMKGDLRDALLVLIS 668
>SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25)
Length = 803
Score = 60.1 bits (139), Expect = 1e-09
Identities = 34/102 (33%), Positives = 62/102 (60%), Gaps = 6/102 (5%)
Frame = +3
Query: 141 LRKAMKGFGTD--EKAIIDVLCR----RGIVQRLEIAETFKTNYGKDLISELKSELTGNL 302
L +A++G ++ + AIID+L R R + RL+ + +K + +D++ L+ L ++
Sbjct: 353 LHQAIQGMVSEGNKDAIIDILARNCDERSKLDRLK--DKYKDQHDQDILEALQPHLGDDV 410
Query: 303 ENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSN 428
++ + + + F AK LHDA+ G+GTDE+ +IEI+CT N
Sbjct: 411 KDPVESFFSSSSAFDAKCLHDAIKGLGTDEDLLIEIICTRKN 452
Score = 58.8 bits (136), Expect = 3e-09
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +3
Query: 171 DEKAIIDVLCRRGIVQRL-EIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFY 347
D++ I+ +L R ++ ++ + +K Y KDL ELKS L + + +L
Sbjct: 21 DKERIMGILGRTSEKDKMNKLEDKYKDLYKKDLNEELKSVLDEEIMKALESLAEEAAMKD 80
Query: 348 AKELHDAVSGIGTDEEAIIEILCTLSNYGIR 440
AK L++A G GTDE+A+I ILCT SN G R
Sbjct: 81 AKTLYEATKGFGTDEDALISILCTRSNKGQR 111
Score = 35.9 bits (79), Expect = 0.020
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 138 TLRKAMKGFGTDEKAIIDVLCRR 206
TL +A KGFGTDE A+I +LC R
Sbjct: 83 TLYEATKGFGTDEDALISILCTR 105
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 54.8 bits (126), Expect = 4e-08
Identities = 33/122 (27%), Positives = 60/122 (49%)
Frame = +3
Query: 156 KGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTPL 335
K +GTDE VL R Q + +D+++ + E++G+L+ + P
Sbjct: 27 KKWGTDESRFNVVLASRSFPQLQATFNEYIKISQRDIMNSIDREMSGDLKAGLQCARNPA 86
Query: 336 PHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDPSGH 515
+F A L ++ G GTD+ +I ++ + S + I A + Q Y K++ ++GD SG
Sbjct: 87 EYF-ADRLWKSMKGAGTDDSLLIRVVVSRSEVDLVEIKASFLQKYHKTVYKMIEGDCSGD 145
Query: 516 FK 521
+K
Sbjct: 146 YK 147
Score = 44.0 bits (99), Expect = 8e-05
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +3
Query: 141 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 320
L K+MKG GTD+ +I V+ R V +EI +F Y K + ++ + +G+ + +++A
Sbjct: 93 LWKSMKGAGTDDSLLIRVVVSRSEVDLVEIKASFLQKYHKTVYKMIEGDCSGDYKKLLMA 152
Query: 321 LMTP 332
L +P
Sbjct: 153 LPSP 156
>SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1593
Score = 33.1 bits (72), Expect = 0.14
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Frame = +3
Query: 312 IVALMTPLPHFYAK-ELHDAVSGIGTDEEA---IIEILCTLSNYGIRTISAFYEQLYGKS 479
+V + +F K E+HDA+ G T+ ++ +++ L ++YG + S + +L G S
Sbjct: 537 VVTVFNMTSNFTTKSEVHDAIDGAVTENDSYRKVLDFLKEWASYGNKEYSEAWIRLDGIS 596
Query: 480 LESDLKGDPSGH 515
+E+ LKG S H
Sbjct: 597 VEA-LKGKSSWH 607
>SB_49312| Best HMM Match : Mucin (HMM E-Value=0.19)
Length = 925
Score = 30.7 bits (66), Expect = 0.76
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +1
Query: 271 ANSRVNSPATWKMSSSH**LPCPTSTLRSSTMLSQELEPTKKPSSRSCARFPTMVSVPYP 450
A N P T S +P T+ + ++ L+PTK S + PT+ +P
Sbjct: 206 AKGTYNFPLTKSTKSQPATIPVSTTKFPTEAQTTEYLQPTKTSLSSTAPPHPTVYRLPST 265
Query: 451 HFTNNCTARA 480
NN T A
Sbjct: 266 ESINNFTDTA 275
>SB_12472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 335 APLLR*GAPRCCLRNWNRRRSHHRDP 412
+P L PRCC +N N R H DP
Sbjct: 138 SPFLYEPGPRCCNQNMNNRSKCHADP 163
>SB_23071| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +3
Query: 204 RGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVS--- 374
R +V RL+I +T + K+ L I++L+T Y + L +A+
Sbjct: 81 RNLVSRLKITFAGETLQDTNRYDVFKTYEELYLSKTILSLLTDHGELYPRALSEALLFEI 140
Query: 375 GIGTDEEAIIEILCTLSNYGIRTISAFYEQL 467
+ T ++ ++ T +YGI+ + YE L
Sbjct: 141 TLATVDQVVVGSDATKLSYGIKNLELEYENL 171
>SB_28559| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 893
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +2
Query: 83 VHPHGVPRGAFRPGRGCRDPSQGYEG 160
VHP G PR RP G R P G+ G
Sbjct: 661 VHPRG-PRATRRPEEGVRSPVSGHRG 685
>SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11)
Length = 834
Score = 29.1 bits (62), Expect = 2.3
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Frame = +3
Query: 186 IDVLCRRGIVQRLEIAETFK-TNYGKDLISELKSELTGNLENVIVALMTPLPHF----YA 350
I+ CR G + + + + + T G ++I + T +++P Y
Sbjct: 524 IENACRAGPIANMTLRDLDRATKDGDEMIVTILKHKTSASAGPAHVVLSPTVFTWLKAYV 583
Query: 351 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSL 482
K + + VSG GTD + + I T+S ISA L+ K++
Sbjct: 584 KYMRNKVSGAGTDPDEKVFISFTVSEMTSFMISAQLNSLWQKAV 627
>SB_25942| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1062
Score = 28.7 bits (61), Expect = 3.1
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Frame = +3
Query: 186 IDVLCRRGIVQRLEIAETFK-TNYGKDLISELKSELTGNLENVIVALMTPLPHF----YA 350
I+ CR G + + + + + T G ++I + T +++P Y
Sbjct: 435 IENACRAGPLPNMTLRDLDRATKDGDEMIVTILKHKTSASAGPAHVVLSPTVFTWLKAYV 494
Query: 351 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 485
K + + VSG GTD + + I T S ISA + K++E
Sbjct: 495 KYMRNKVSGAGTDPDEKVFISFTASEMTSSMISAQLNSFWQKAVE 539
>SB_18204| Best HMM Match : Phage_integr_N (HMM E-Value=0.24)
Length = 285
Score = 28.7 bits (61), Expect = 3.1
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Frame = +3
Query: 186 IDVLCRRGIVQRLEIAETFK-TNYGKDLISELKSELTGNLENVIVALMTPLPHF----YA 350
I+ CR G + + + + + T G ++I + T +++P Y
Sbjct: 171 IENACRAGPLANMTLRDLDRATKDGDEMIVTILKHKTSASAGPAHVVLSPTVFTWLKAYV 230
Query: 351 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 485
K + + VSG GTD + + I T S ISA + K++E
Sbjct: 231 KYMRNKVSGAGTDPDEKVFISFTASEMTSSMISAQLNSFWQKAVE 275
>SB_31195| Best HMM Match : PspA_IM30 (HMM E-Value=1)
Length = 345
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 345 YAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 485
Y K + + VSG GTD + + I T S ISA + K++E
Sbjct: 47 YVKYMRNKVSGAGTDPDEKVFISFTASEMTSSMISAQLNSFWQKAVE 93
>SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08)
Length = 266
Score = 28.3 bits (60), Expect = 4.1
Identities = 24/116 (20%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Frame = +3
Query: 183 IIDVLCRRGIVQRLEIAETFKTNYGKD--LISELKSELTGNLENVIVALMTPLPHFYAKE 356
++ +L + I + L+ ++NYG+ L S+ S L +++++ + + +
Sbjct: 149 VVPILSFKDIQEPLDYVS--ESNYGQQVSLFSKNPSSLAPLIDSLVNQVCRVNINTKCQR 206
Query: 357 LHDAVSGIGTDEEAI--IEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDPSGHF 518
D + +G + A+ + + L + IRT+ AF + SDL + S +F
Sbjct: 207 GPDVLPFVGRKDSAVSTLSVYDALRTFSIRTLVAFRSNAINDKILSDLLENESSNF 262
>SB_26916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1732
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 79 TSAPPRCTPRSLSTRPRMPRPFARL 153
T +PPRCTP L RP F L
Sbjct: 47 TPSPPRCTPSPLPRRPNTTVGFYEL 71
>SB_25237| Best HMM Match : Phage_integrase (HMM E-Value=0.2)
Length = 845
Score = 27.5 bits (58), Expect = 7.1
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 9/119 (7%)
Frame = +3
Query: 186 IDVLCRRGIVQRLEIAETFK-TNYGKDLISELKSELTGNLENVIVALMTPLPHF----YA 350
I+ CR G + + + + + T G ++I + T +++P Y
Sbjct: 524 IENACRAGPIANMTLRDLDRATKDGDEMIVTILKHKTSASAGPAHVVLSPTVFTWLKAYV 583
Query: 351 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISA----FYEQLYGKSLESDLKGDPSGH 515
K + + VSG GTD + + I T+S ISA +++L G+ LE+ + + + H
Sbjct: 584 KYMRNKVSGAGTDPDEKVFISFTVSEMTSFMISAQLNSLWQRLSGR-LENIMYAEGASH 641
>SB_52231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 432
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 159 GFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLIS-ELKSELTGNLENVIVALMTPL 335
G+G D + D LC +GI +I E + L S ++ ++ T L + + L
Sbjct: 162 GYGEDLQLRSDYLCPKGICAGTDIGEKLSDHVYIFLCSIDVGTDSTVELSDAGYEFLIDL 221
Query: 336 PHFYAKELHDAVSGIGTDEEAI 401
+ Y K+ +A+S + ++ ++
Sbjct: 222 FNKYDKDQDEALSPVELEDSSL 243
>SB_52045| Best HMM Match : DUF1605 (HMM E-Value=3.8e-14)
Length = 812
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 407 DPVHAFQLWYPYHIRILRTTVRQEPG 484
+PVH F YH ++ R R+ PG
Sbjct: 727 NPVHGFSSGLRYHEQVTRNQARKSPG 752
>SB_48269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1720
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/69 (26%), Positives = 27/69 (39%)
Frame = +1
Query: 286 NSPATWKMSSSH**LPCPTSTLRSSTMLSQELEPTKKPSSRSCARFPTMVSVPYPHFTNN 465
+ P T+ +S+H PC S +L E P R C+ T P P F+
Sbjct: 69 HKPRTYYENSTHDCQPCSYCCKPESAVLQAECAAQGLPKQRQCSIHDT-CPTPTPRFSGQ 127
Query: 466 CTARAWNRT 492
+ A + T
Sbjct: 128 TSLPAKSTT 136
>SB_29561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 225 EIAETFKTNYGKDLISELKSELTGNLENVIVALMT 329
E+ + + KDL SEL ELT L N + + +T
Sbjct: 25 ELTKELTSELTKDLTSELTKELTSELTNDLTSELT 59
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,482,060
Number of Sequences: 59808
Number of extensions: 328336
Number of successful extensions: 1163
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -