Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306B01f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    23   2.2  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   2.9  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   2.9  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   3.8  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   3.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.6  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   8.7  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   8.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.7  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -3

Query: 459 DLSIIHKSSLTIDTV 415
           DLS +HK++LTI+ +
Sbjct: 100 DLSSVHKTTLTIENL 114


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 310 PRTPYENRMYSLKIECGTRYPDEPP 384
           P+   EN  Y   ++CG R   EPP
Sbjct: 65  PKFLTENCDYIHNVDCGDRTQLEPP 89


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 310 PRTPYENRMYSLKIECGTRYPDEPP 384
           P+   EN  Y   ++CG R   EPP
Sbjct: 65  PKFLTENCDYIHNVDCGDRTQLEPP 89


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 304 GPPRTPYENRMYSLKIE 354
           GPPRTP + ++ + K++
Sbjct: 59  GPPRTPLQPKLVAGKLK 75


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
 Frame = +1

Query: 151 ANPSSGVVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTH-WTG 294
           AN      +  +++  + L+        GTI W L   +D      W G
Sbjct: 185 ANQWYSQTIDNSYQFCDNLQYSFDNQCSGTIDWALPKQEDCFYQEGWNG 233


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 490 IVTLPSSKNWGLV 452
           I T+PS + WG++
Sbjct: 370 ITTVPSEQQWGIL 382


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 254 RPQEMVPSPTPFWPCSSS 201
           +P +  P P PF+P +S+
Sbjct: 201 QPLQPFPPPYPFYPGTSA 218


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -3

Query: 150 HDHSITGLENCK 115
           H H++ G E CK
Sbjct: 130 HPHNLVGREGCK 141


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 105 NLSFYSSLSR*YCDH 149
           N S YSS SR + DH
Sbjct: 149 NYSAYSSASRHHVDH 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,287
Number of Sequences: 336
Number of extensions: 2787
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)