Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306B01f
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 6e-10
SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 3e-09
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 6e-05
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37) 42 4e-04
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 38 0.004
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 37 0.009
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 36 0.015
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 35 0.035
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 34 0.062
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 34 0.062
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0) 34 0.062
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_23434| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018) 27 7.1
SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8) 27 9.4
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017) 27 9.4
SB_25941| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 60.9 bits (141), Expect = 6e-10
Identities = 26/47 (55%), Positives = 37/47 (78%)
Frame = +1
Query: 316 TPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQ 456
T +ENR+Y+LKI CG YP +PPT +F+S+I+MN VNS+ G D+R+
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSK-GETDDRE 46
>SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 58.4 bits (135), Expect = 3e-09
Identities = 23/39 (58%), Positives = 32/39 (82%)
Frame = +1
Query: 316 TPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQ 432
T +ENR+Y+LKI CG YP +PPT +F+S+I+MN VNS+
Sbjct: 1 TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSK 39
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 44.4 bits (100), Expect = 6e-05
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 265 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMN 417
DD L W M++GPP T YE + + YP PPT FIS I H N
Sbjct: 358 DDEDLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFISDIWHPN 409
>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
Length = 190
Score = 41.5 bits (93), Expect = 4e-04
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 298 IIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMNCVNSQTGLVDNRQVP 462
+IG TPY ++ L I+ RYP EPP RF++ I H N +S +D ++P
Sbjct: 2 LIGAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMP 57
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = +1
Query: 268 DMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPP 384
D T T G I GPP TP+E Y+L I YP PP
Sbjct: 683 DETFTKLKGEIRGPPETPFEGGTYNLDIVIPETYPFNPP 721
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 37.1 bits (82), Expect = 0.009
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +1
Query: 253 LESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMNCVNS 429
+E D+ W I GPP T Y + + YP PPT RF++++ H N S
Sbjct: 1146 VEVPDESNTFEWDVAIFGPPGTLYAGGYFKAHMSFPHDYPYSPPTFRFLTKMWHPNIYES 1205
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 36.3 bits (80), Expect = 0.015
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 295 MIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 402
MI GP TPY++ +++ I YPD PP+ ++S
Sbjct: 639 MIEGPAGTPYDHGLFAFDILLPANYPDAPPSFHYLS 674
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 35.1 bits (77), Expect = 0.035
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 277 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPP 384
L W I+GPP + YE ++ L I T YP +PP
Sbjct: 51 LYEWYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPP 86
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 34.3 bits (75), Expect = 0.062
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 244 SWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPP 384
S G + DD L W I+GPP + YE ++ L I + YP +PP
Sbjct: 156 SAGPKGDD---LYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPP 199
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 34.3 bits (75), Expect = 0.062
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 244 SWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPP 384
S G + DD L W I+GPP + YE ++ L I + YP +PP
Sbjct: 116 SAGPKGDD---LYEWYSTILGPPGSVYEGGVFFLDIHFPSDYPFKPP 159
>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 145
Score = 34.3 bits (75), Expect = 0.062
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 265 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIH 411
D+ + +W G+I+ P PY + ++I YP +PP F ++I+
Sbjct: 19 DESNILYWQGLIV-PEMPPYNKGAFRIEICFPAEYPFKPPKITFKTKIY 66
>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 265 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 402
DD+ H +I GP TPYE + I C YP PP + ++
Sbjct: 8 DDIPKIH--ALITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMT 51
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Frame = +1
Query: 238 TISWG-LESDDDMT----LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPT-ARFI 399
T S+G +ES ++T L + GP TPYE ++ ++++ +YP + P+ A F
Sbjct: 29 TDSFGRIESKHEVTILGGLNEFIVKFFGPVGTPYEGGVWKVRVDLPEKYPFKSPSIANFT 88
Query: 400 SRIHMNCV 423
I + CV
Sbjct: 89 IEISV-CV 95
>SB_23434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 27.9 bits (59), Expect = 5.4
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = -3
Query: 396 KAGCWWLIRVSCSTFNFKGVHSILVGCPW 310
+ GC W++ C ++ ++VGC W
Sbjct: 20 ECGCGWVVAAECGCGGCGQLNVVVVGCGW 48
>SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018)
Length = 3561
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = -3
Query: 399 NKAGCWWLIRVSCSTFNFKGVHSILVGCPWWANNHSSPMSKSHIIIAFKTPRNGSIAH 226
N + C W++ ++ S + ILV CP +S M + F NG ++H
Sbjct: 189 NPSSCHWMLDLASSNLSLSSGAKILVSCPINLTANSLTMQTNS---QFNIFGNGKVSH 243
>SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8)
Length = 55
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +1
Query: 265 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 402
D+ + ++ GP TPY + I YP+ PP + I+
Sbjct: 1 DENRMDFARALVTGPVDTPYSRGCFVFDIFFPGTYPNVPPLVKLIT 46
>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +1
Query: 277 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 402
L W + GPP T + Y +I YP +PP+ ++
Sbjct: 38 LFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLT 79
>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
Length = 123
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +1
Query: 277 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 402
L W + GPP T + Y +I YP +PP+ ++
Sbjct: 3 LFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLLT 44
>SB_25941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 316 TPYENRMYSLKIECGTRYPDEPPTARF 396
T +E + +K CG R+PD P A F
Sbjct: 6 TAFETNLIPMK-HCGLRFPDSPSAALF 31
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,437,421
Number of Sequences: 59808
Number of extensions: 333834
Number of successful extensions: 779
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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