Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306B01f
(521 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 138 2e-33
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 136 6e-33
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 135 1e-32
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 135 2e-32
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 132 1e-31
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 131 3e-31
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 51 5e-07
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 50 1e-06
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 50 1e-06
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 50 1e-06
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 48 4e-06
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 46 2e-05
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 46 2e-05
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 46 2e-05
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 44 6e-05
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 43 1e-04
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 43 1e-04
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 42 3e-04
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 42 3e-04
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 41 4e-04
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 41 4e-04
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 41 6e-04
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 41 6e-04
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 41 6e-04
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 40 8e-04
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 40 8e-04
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 40 8e-04
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 40 0.001
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 39 0.002
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 39 0.002
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 39 0.002
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 39 0.002
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 38 0.003
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 38 0.004
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 37 0.007
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 37 0.009
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 37 0.009
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 35 0.029
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 34 0.050
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 34 0.067
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 34 0.067
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 33 0.088
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 33 0.088
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 33 0.12
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 33 0.15
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 32 0.27
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 31 0.36
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 31 0.62
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 30 1.1
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 29 1.4
At1g55915.1 68414.m06413 expressed protein similar to Hypothetic... 29 1.4
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 28 3.3
At5g16590.1 68418.m01942 leucine-rich repeat transmembrane prote... 28 4.4
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 28 4.4
At5g08200.1 68418.m00959 peptidoglycan-binding LysM domain-conta... 27 5.8
At2g47310.1 68415.m05906 flowering time control protein-related ... 27 5.8
At2g31030.1 68415.m03783 oxysterol-binding family protein simila... 27 5.8
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 27 5.8
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 138 bits (334), Expect = 2e-33
Identities = 57/105 (54%), Positives = 80/105 (76%)
Frame = +1
Query: 148 MANPSSGVVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYE 327
M++ + VVVPRNFRLLEELE+G+KG+GDGT+S+G++ DD+ + WTG I+GPP T YE
Sbjct: 1 MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYE 60
Query: 328 NRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQVP 462
+++ LK+ CG YP+ PPT RF +RI+M CVN +TG+V+ P
Sbjct: 61 GKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFP 105
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 136 bits (330), Expect = 6e-33
Identities = 58/98 (59%), Positives = 77/98 (78%)
Frame = +1
Query: 163 SGVVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYS 342
S VVVPRNFRLLEELE+G+KG+GDGT+S+G++ DD+ + WTG IIGP T +E R+Y
Sbjct: 7 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQ 66
Query: 343 LKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQ 456
LK+ C YP++PPT RF SRI+M CVN TG+VD+++
Sbjct: 67 LKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKK 104
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +2
Query: 419 VSIVKLDLWIID--KSPILARWQRDYTIKTVLQEVR 520
++ V D ++D K +LA WQR YT++ +L +++
Sbjct: 90 MTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLK 125
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 135 bits (327), Expect = 1e-32
Identities = 57/103 (55%), Positives = 79/103 (76%)
Frame = +1
Query: 148 MANPSSGVVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYE 327
+ + S VVVPRNFRLLEELE+G+KG+GDGT+S+G++ DD+ + WTG IIGP T +E
Sbjct: 3 LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHE 62
Query: 328 NRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQ 456
R+Y LK+ C YP++PPT RF SR++M CVN +TG+VD ++
Sbjct: 63 GRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKK 105
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +2
Query: 455 KSPILARWQRDYTIKTVLQEVR 520
K +LA WQR+YT++ +L +++
Sbjct: 105 KFGLLANWQREYTMEDILVQLK 126
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 135 bits (326), Expect = 2e-32
Identities = 57/105 (54%), Positives = 76/105 (72%)
Frame = +1
Query: 148 MANPSSGVVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYE 327
M + VVVPRNFRLLEELE+G+KG+GDGT+S+G++ DD+ + WTG I+GP T YE
Sbjct: 1 MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60
Query: 328 NRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQVP 462
+++ LK+ CG YP+ PPT RF SRI+M CVN + G+VD P
Sbjct: 61 GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFP 105
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 132 bits (319), Expect = 1e-31
Identities = 58/99 (58%), Positives = 77/99 (77%), Gaps = 1/99 (1%)
Frame = +1
Query: 163 SGVVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPR-TPYENRMY 339
S VVVPRNFRLLEELE+G+KG+GDGT+S+G++ DD+ + WTG IIGP T +E R+Y
Sbjct: 7 SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRIY 66
Query: 340 SLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQ 456
LK+ C YP++PPT RF SRI+M CVN TG+VD+++
Sbjct: 67 QLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKK 105
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +2
Query: 419 VSIVKLDLWIID--KSPILARWQRDYTIKTVLQEVR 520
++ V D ++D K +LA WQR YT++ +L +++
Sbjct: 91 MTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLK 126
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 131 bits (316), Expect = 3e-31
Identities = 57/104 (54%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Frame = +1
Query: 148 MANPSSGVVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPR-TPY 324
+ + S VVVPRNFRLLEELE+G+KG+GDGT+S+G++ DD+ + WTG IIGP T +
Sbjct: 3 LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVTVH 62
Query: 325 ENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDNRQ 456
E R+Y LK+ C YP++PPT RF SR++M CVN +TG+VD ++
Sbjct: 63 EGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKK 106
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +2
Query: 455 KSPILARWQRDYTIKTVLQEVR 520
K +LA WQR+YT++ +L +++
Sbjct: 106 KFGLLANWQREYTMEDILVQLK 127
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 50.8 bits (116), Expect = 5e-07
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +1
Query: 265 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTG 438
DD + WT +I GP TPYE ++ L YP +PP RF+++I V+ +TG
Sbjct: 30 DDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTG 87
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 49.6 bits (113), Expect = 1e-06
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +1
Query: 178 PRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIEC 357
P RL+ + ++ Q+ G IS G D+++ L W +I GP TP++ + L ++
Sbjct: 4 PARKRLMRDFKRLQQDPPAG-IS-GAPQDNNIML--WNAVIFGPDDTPWDGGTFKLSLQF 59
Query: 358 GTRYPDEPPTARFISRI-HMN 417
YP++PPT RF+SR+ H N
Sbjct: 60 SEDYPNKPPTVRFVSRMFHPN 80
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 49.6 bits (113), Expect = 1e-06
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +1
Query: 178 PRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIEC 357
P RL+ + ++ Q+ G IS G D+++ L W +I GP TP++ + L ++
Sbjct: 4 PARKRLMRDFKRLQQDPPAG-IS-GAPQDNNIML--WNAVIFGPDDTPWDGGTFKLSLQF 59
Query: 358 GTRYPDEPPTARFISRI-HMN 417
YP++PPT RF+SR+ H N
Sbjct: 60 SEDYPNKPPTVRFVSRMFHPN 80
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 49.6 bits (113), Expect = 1e-06
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +1
Query: 178 PRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIEC 357
P RL+ + ++ Q+ G IS G D+++ L W +I GP TP++ + L ++
Sbjct: 4 PARKRLMRDFKRLQQDPPAG-IS-GAPQDNNIML--WNAVIFGPDDTPWDGGTFKLSLQF 59
Query: 358 GTRYPDEPPTARFISRI-HMN 417
YP++PPT RF+SR+ H N
Sbjct: 60 SEDYPNKPPTVRFVSRMFHPN 80
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 48.0 bits (109), Expect = 4e-06
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 169 VVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLK 348
+ P RL+ + ++ QK G IS G D++ + HW +I GP TP++ + L
Sbjct: 1 MTTPAKKRLMWDFKRLQKDPPVG-IS-GAPQDNN--IMHWNALIFGPEDTPWDGGTFKLT 56
Query: 349 IECGTRYPDEPPTARFISRI-HMN 417
+ YP++PP RF+SR+ H N
Sbjct: 57 LHFTEDYPNKPPIVRFVSRMFHPN 80
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/85 (31%), Positives = 44/85 (51%)
Frame = +1
Query: 190 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 369
R+ +EL+ ++ I +SD+ LT TG I GP TPYE + + I Y
Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDN---LTRLTGTIPGPIGTPYEGGTFQIDITMPDGY 62
Query: 370 PDEPPTARFISRIHMNCVNSQTGLV 444
P EPP +F +++ ++SQ+G +
Sbjct: 63 PFEPPKMQFSTKVWHPNISSQSGAI 87
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 45.6 bits (103), Expect = 2e-05
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = +1
Query: 190 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 369
R+L+EL+ QK S G ++D + HW I+GPP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDP-PSNCSAGPVAED---MFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 370 PDEPPTARFISRIHMNCVNS 429
P +PP F ++++ +NS
Sbjct: 61 PFKPPKVSFKTKVYHPNINS 80
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +1
Query: 286 WTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLVDN 450
WT +I GP TPYE M++L I+ T YP +PP F + I+ +N + + N
Sbjct: 39 WTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMN 93
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 44.0 bits (99), Expect = 6e-05
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +1
Query: 190 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 369
R+L+EL+ QK I G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPTSCIFAGPVAED---MFHWQATIMGPAESPYSGGVFLVTIHFPPDY 61
Query: 370 PDEPPTARFISRIHMNCVNS 429
P +PP F +++ +NS
Sbjct: 62 PFKPPKVAFRTKVFHPNINS 81
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +1
Query: 265 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMN 417
D+ + W+ IIGPP T YE + + YP+ PPT RF S I H N
Sbjct: 30 DEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPN 81
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 42.7 bits (96), Expect = 1e-04
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +1
Query: 277 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIH 411
L HW IIGP TPYE ++ L I + YP +PP F +RI+
Sbjct: 65 LYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIY 109
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +1
Query: 256 ESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 402
+S D + W+ IIGPP T YE ++ + YP+ PPT RF S
Sbjct: 59 QSCDCYNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTS 107
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 41.9 bits (94), Expect = 3e-04
Identities = 26/92 (28%), Positives = 46/92 (50%)
Frame = +1
Query: 154 NPSSGVVVPRNFRLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENR 333
N G++ + R+L+EL+ QK + S G ++D + HW I+GP +PY
Sbjct: 23 NLDRGILEMASKRILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPSDSPYSGG 78
Query: 334 MYSLKIECGTRYPDEPPTARFISRIHMNCVNS 429
++ + I YP +PP F +++ +NS
Sbjct: 79 VFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 110
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 41.1 bits (92), Expect = 4e-04
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 259 SDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMNCVNSQT 435
S D T + I GP T Y N +++LKI+ RYP +PP F + I H N NS
Sbjct: 38 SGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGR 97
Query: 436 GLVDNRQVP 462
+D +P
Sbjct: 98 ICLDILNLP 106
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 41.1 bits (92), Expect = 4e-04
Identities = 21/81 (25%), Positives = 43/81 (53%)
Frame = +1
Query: 190 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 369
R+ EL Q+ S G +++D + HW I+GP +PY ++++ I+ + Y
Sbjct: 5 RISRELRDMQRHP-PANCSAGPVAEED--IFHWQATIMGPHDSPYSGGVFTVSIDFSSDY 61
Query: 370 PDEPPTARFISRIHMNCVNSQ 432
P +PP F ++++ ++S+
Sbjct: 62 PFKPPKVNFKTKVYHPNIDSK 82
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 40.7 bits (91), Expect = 6e-04
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = +1
Query: 190 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 369
R+L+EL+ QK + S G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 370 PDEPPTARFISRIHMNCVNS 429
P +PP F +++ +NS
Sbjct: 61 PFKPPKVAFRTKVFHPNINS 80
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 40.7 bits (91), Expect = 6e-04
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = +1
Query: 190 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 369
R+L+EL+ QK + S G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 370 PDEPPTARFISRIHMNCVNS 429
P +PP F +++ +NS
Sbjct: 61 PFKPPKVAFRTKVFHPNINS 80
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 40.7 bits (91), Expect = 6e-04
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = +1
Query: 190 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 369
R+L+EL+ QK + S G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 370 PDEPPTARFISRIHMNCVNS 429
P +PP F +++ +NS
Sbjct: 61 PFKPPKVAFRTKVFHPNINS 80
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 40.3 bits (90), Expect = 8e-04
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = +1
Query: 190 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 369
R+L+EL+ QK + S G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 370 PDEPPTARFISRIHMNCVNS 429
P +PP F +++ +NS
Sbjct: 61 PFKPPKVAFRTKVFHPNINS 80
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 40.3 bits (90), Expect = 8e-04
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = +1
Query: 190 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 369
R+L+EL+ QK + S G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 370 PDEPPTARFISRIHMNCVNS 429
P +PP F +++ +NS
Sbjct: 61 PFKPPKVAFRTKVFHPNINS 80
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 40.3 bits (90), Expect = 8e-04
Identities = 25/80 (31%), Positives = 41/80 (51%)
Frame = +1
Query: 190 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 369
R+L+EL+ QK + S G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 370 PDEPPTARFISRIHMNCVNS 429
P +PP F +++ VNS
Sbjct: 61 PFKPPKVAFRTKVFHPNVNS 80
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = +1
Query: 190 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 369
R+L+EL+ QK + S G ++D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKDLQKDPPT-SCSAGPVAED---MFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 370 PDEPPTARFISRIHMNCVNS 429
P +PP F +++ +NS
Sbjct: 61 PFKPPKVAFRTKVFHPNINS 80
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/80 (28%), Positives = 41/80 (51%)
Frame = +1
Query: 190 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 369
R+L+EL++ Q+ + S G +D + HW I+GP +PY ++ + I Y
Sbjct: 5 RILKELKELQRDP-PVSCSAGPTGED---MFHWQATIMGPNESPYSGGVFLVNIHFPPDY 60
Query: 370 PDEPPTARFISRIHMNCVNS 429
P +PP F +++ +NS
Sbjct: 61 PFKPPKVVFRTKVFHPNINS 80
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/51 (33%), Positives = 32/51 (62%)
Frame = +1
Query: 259 SDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIH 411
S+D+M ++ MI+GP ++PYE ++ L++ YP P RF+++I+
Sbjct: 30 SEDNMR--YFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY 78
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/51 (33%), Positives = 32/51 (62%)
Frame = +1
Query: 259 SDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIH 411
S+D+M ++ MI+GP ++PYE ++ L++ YP P RF+++I+
Sbjct: 30 SEDNMR--YFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY 78
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +1
Query: 259 SDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIH 411
S + + ++ MI+GP ++PYE ++ L++ YP P RF+++I+
Sbjct: 28 SPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY 78
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 265 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMN 417
D+ + W+ I+GPP T YE ++ + YP PPT F S + H N
Sbjct: 31 DEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPN 82
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +1
Query: 277 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIH 411
+ ++ MI+GP ++PYE ++ L++ YP P RF+++I+
Sbjct: 1 MRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY 45
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 37.1 bits (82), Expect = 0.007
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 277 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 402
L WT + G P T Y N Y L++E YP E P F+S
Sbjct: 43 LQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEAPQVVFVS 84
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 36.7 bits (81), Expect = 0.009
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 298 IIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRI-HMNCVNS 429
I GP TPYEN ++ +K+ +P PP F+++I H N ++
Sbjct: 46 IEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASN 90
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 36.7 bits (81), Expect = 0.009
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 190 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 369
RL +E ++ + SW L S ++ + W + GP PYE ++++ + +Y
Sbjct: 33 RLWKEFQEKDDVLKIHVRSW-LPSPEN--IFRWEATVNGPVGCPYEKGVFTVSVHIPPKY 89
Query: 370 PDEPPTARFISRI-HMN 417
P EPP F ++I H N
Sbjct: 90 PYEPPKITFKTKIFHPN 106
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 35.1 bits (77), Expect = 0.029
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +1
Query: 190 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 369
R+L+E+++ Q D +S LE + + W I GP T +E +Y +I+ Y
Sbjct: 15 RILQEVKEMQANPSDDFMSLPLEEN----IFEWQFAIRGPGDTEFEGGIYHGRIQLPADY 70
Query: 370 PDEPPT 387
P +PP+
Sbjct: 71 PFKPPS 76
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 34.3 bits (75), Expect = 0.050
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 277 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFI 399
L W + G P T Y N Y+L++E YP E P F+
Sbjct: 43 LQKWVIEVTGAPGTLYANETYNLQVEFPQHYPMEAPQVIFV 83
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 33.9 bits (74), Expect = 0.067
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +1
Query: 265 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNS 429
DDM W I+GP +P+ ++ + I YP +PP F ++++ +NS
Sbjct: 28 DDMF--QWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINS 80
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 33.9 bits (74), Expect = 0.067
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +1
Query: 265 DDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNS 429
DDM W I+GP +P+ ++ + I YP +PP F ++++ +NS
Sbjct: 28 DDMF--QWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINS 80
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 33.5 bits (73), Expect = 0.088
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = +1
Query: 262 DDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGL 441
+DD+ + + T GP + Y+ ++ +K+E YP + P+ F+++I+ V+ +G
Sbjct: 26 NDDLQMFYVT--FHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGA 83
Query: 442 V 444
V
Sbjct: 84 V 84
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 33.5 bits (73), Expect = 0.088
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 277 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFI 399
L W +IG P T Y N Y L+++ YP E P F+
Sbjct: 43 LQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPMESPQVIFL 83
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 33.1 bits (72), Expect = 0.12
Identities = 24/69 (34%), Positives = 30/69 (43%)
Frame = +1
Query: 190 RLLEELEQGQKGVGDGTISWGLESDDDMTLTHWTGMIIGPPRTPYENRMYSLKIECGTRY 369
RL EL G G G IS E D+ + W G I G T +E Y L + Y
Sbjct: 39 RLQSELMGLMMGGGPG-ISAFPEEDN---IFCWKGTITGSKDTVFEGTEYRLSLSFSNDY 94
Query: 370 PDEPPTARF 396
P +PP +F
Sbjct: 95 PFKPPKVKF 103
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 32.7 bits (71), Expect = 0.15
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +1
Query: 304 GPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLV 444
GP + YE ++ +++E YP + P+ FI++I+ V+ +G V
Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSV 84
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 31.9 bits (69), Expect = 0.27
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 298 IIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 402
++G P TPY + ++ I +YP EPP + S
Sbjct: 698 LVGAPGTPYHDGLFFFDIMLPPQYPHEPPMVHYHS 732
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +1
Query: 277 LTHWTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARF 396
L W + G P T Y N Y L++E YP E P F
Sbjct: 43 LQRWIIEVHGVPGTLYANETYQLQVEFPEHYPMEAPQVIF 82
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 30.7 bits (66), Expect = 0.62
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +1
Query: 304 GPPRTPYENRMYSLKIECGTRYPDEPPTARFISRIHMNCVNSQTGLV 444
GP + Y+ ++ +++E YP + P+ FI++I+ V+ +G V
Sbjct: 38 GPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSV 84
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +1
Query: 295 MIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS---RIHMNCVN 426
+IIG TPY + ++ I+ YP PP + S RI+ N N
Sbjct: 306 VIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYN 352
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +1
Query: 295 MIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS---RIHMNCVNSQTGLV 444
+IIG TPY + ++ I+ YP PP + S RI+ N N LV
Sbjct: 952 VIIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNCGKVLV 1004
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 295 MIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 402
+IIG TPY + ++ I+ YP PP + S
Sbjct: 640 VIIGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHS 675
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 29.5 bits (63), Expect = 1.4
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +1
Query: 190 RLLEELEQGQKGVGDGTISWGLESDDD-MTLTHWTGMIIGPPRTPYENRMYSLKIECGTR 366
RL EE + +K G ++ D + L W I G T +E + L +
Sbjct: 9 RLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLTMHFSED 68
Query: 367 YPDEPPTARF 396
YP +PP +F
Sbjct: 69 YPSKPPKCKF 78
>At1g55915.1 68414.m06413 expressed protein similar to Hypothetical
30.6 kDa protein in ACT5-YCK1 intergenic region
(Swiss-Prot:P38838) [Saccharomyces cerevisiae]; similar
to Yhr134wp (GI:500671) [Saccharomyces cerevisiae]
Length = 404
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 375 IRVSCSTFNFKGVHSILVGCPWWANNHSSPMSKSH 271
IR +C++ N K V C W+N HS P S SH
Sbjct: 236 IRETCTSVNGKSVKR----CNSWSNAHSCPPSSSH 266
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +1
Query: 286 WTGMIIGPPRTPYENRMYSLKIECGTRYPDEPPTARF 396
W G I G T +E Y L + YP + P +F
Sbjct: 68 WKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKF 104
>At5g16590.1 68418.m01942 leucine-rich repeat transmembrane protein
kinase, putative
Length = 625
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 331 RMYSLKIECGTRYPDEPPTARFISRI 408
R+ ++ I C T+YPD PT ++R+
Sbjct: 584 RLLNIGISCTTQYPDSRPTMPEVTRL 609
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 27.9 bits (59), Expect = 4.4
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +1
Query: 295 MIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS---RIHMNCVN 426
+IIG TPY + ++ I YP PP + S RI+ N N
Sbjct: 367 VIIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYN 413
>At5g08200.1 68418.m00959 peptidoglycan-binding LysM
domain-containing protein contains Pfam profile PF01476:
LysM domain
Length = 409
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 239 VPSPTPFWPCSSSSKRRKFRGTTTPDDGF 153
+PSPT P SSSS F G+ +PD G+
Sbjct: 51 IPSPTSSPPPSSSSP--PFHGSNSPDRGY 77
>At2g47310.1 68415.m05906 flowering time control protein-related /
FCA gamma-related
Length = 512
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -1
Query: 236 PSPTPFWPCSSSS--KRRKFRGTTTPDDGFAMITVSPA*RT 120
P P P PC SS KRR T D A + V+P +T
Sbjct: 80 PPPFPPSPCGGSSLRKRRSQSATDNADGSIAKLYVAPISKT 120
>At2g31030.1 68415.m03783 oxysterol-binding family protein similar
to SWH1 [Saccharomyces cerevisiae] GI:402658; contains
Pfam profile PF01237: Oxysterol-binding protein
Length = 489
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 190 RLLEELEQGQKGVGDGTISWGLESDDDM 273
RL EE Q G D I+ G ESDDD+
Sbjct: 68 RLSEEYTQTNTGPDDDWITNGFESDDDV 95
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 1102
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 295 MIIGPPRTPYENRMYSLKIECGTRYPDEPPTARFIS 402
+I+G TPY++ ++ + YP PP+A + S
Sbjct: 885 VIVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHS 920
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,573,180
Number of Sequences: 28952
Number of extensions: 245994
Number of successful extensions: 646
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 957410176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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