Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306A12f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83228-10|CAB05732.2|  585|Caenorhabditis elegans Hypothetical p...    37   0.008
Z83228-1|CAC70093.1|  568|Caenorhabditis elegans Hypothetical pr...    37   0.008
AF110415-1|AAF21932.1|  568|Caenorhabditis elegans organic catio...    37   0.008
Z66567-5|CAA91492.4|  757|Caenorhabditis elegans Hypothetical pr...    33   0.12 
Z66567-7|CAC42386.3|  414|Caenorhabditis elegans Hypothetical pr...    32   0.22 
AF199013-1|AAG28557.1|  414|Caenorhabditis elegans organic catio...    32   0.22 
U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z71264-6|CAC35821.1|  374|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AL008986-1|CAC35820.1|  374|Caenorhabditis elegans Hypothetical ...    27   6.2  

>Z83228-10|CAB05732.2|  585|Caenorhabditis elegans Hypothetical
           protein F52F12.1a protein.
          Length = 585

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +1

Query: 7   LLPLIAGCVTFLLPETKGCEFMTTIEEGEQFG 102
           L+ L AG +TF LPET G     TIE+ E FG
Sbjct: 513 LMALSAGILTFFLPETLGAPLPMTIEDAENFG 544


>Z83228-1|CAC70093.1|  568|Caenorhabditis elegans Hypothetical
           protein F52F12.1b protein.
          Length = 568

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +1

Query: 7   LLPLIAGCVTFLLPETKGCEFMTTIEEGEQFG 102
           L+ L AG +TF LPET G     TIE+ E FG
Sbjct: 496 LMALSAGILTFFLPETLGAPLPMTIEDAENFG 527


>AF110415-1|AAF21932.1|  568|Caenorhabditis elegans organic cation
           transporter 1 protein.
          Length = 568

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +1

Query: 7   LLPLIAGCVTFLLPETKGCEFMTTIEEGEQFG 102
           L+ L AG +TF LPET G     TIE+ E FG
Sbjct: 496 LMALSAGILTFFLPETLGAPLPMTIEDAENFG 527


>Z66567-5|CAA91492.4|  757|Caenorhabditis elegans Hypothetical
           protein ZK455.8a protein.
          Length = 757

 Score = 33.1 bits (72), Expect = 0.12
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +1

Query: 1   FALLPLIAGCVTFLLPETKGCEFMTTIEEGEQ 96
           FA   L+AGC+  LLPET+G     TI +  Q
Sbjct: 669 FACFSLLAGCLVLLLPETQGLPLPDTILDSVQ 700


>Z66567-7|CAC42386.3|  414|Caenorhabditis elegans Hypothetical
           protein ZK455.8b protein.
          Length = 414

 Score = 32.3 bits (70), Expect = 0.22
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +1

Query: 1   FALLPLIAGCVTFLLPETKGCEFMTTI 81
           FA   L+AGC+  LLPET+G     TI
Sbjct: 381 FACFSLLAGCLVLLLPETQGLPLPDTI 407


>AF199013-1|AAG28557.1|  414|Caenorhabditis elegans organic cation
           transporter protein.
          Length = 414

 Score = 32.3 bits (70), Expect = 0.22
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +1

Query: 1   FALLPLIAGCVTFLLPETKGCEFMTTI 81
           FA   L+AGC+  LLPET+G     TI
Sbjct: 381 FACFSLLAGCLVLLLPETQGLPLPDTI 407


>U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical
           protein K02A2.3 protein.
          Length = 1020

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +2

Query: 161 ITFCKLLDSSFVMLRLFCFNSNN--AIIHSDIF 253
           + FC L D S  +  +FC N NN  A    D+F
Sbjct: 290 VDFCNLCDKSLYLESVFCANVNNDEASAEDDVF 322


>Z71264-6|CAC35821.1|  374|Caenorhabditis elegans Hypothetical
           protein K07G5.6 protein.
          Length = 374

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -1

Query: 86  SSMVVMNSQPLVSGNRNVTQPAIKGNN 6
           + ++   S PLV GN+N+T   I+ N+
Sbjct: 168 AKIIEQTSSPLVQGNKNITSSRIEQNS 194


>AL008986-1|CAC35820.1|  374|Caenorhabditis elegans Hypothetical
           protein K07G5.6 protein.
          Length = 374

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -1

Query: 86  SSMVVMNSQPLVSGNRNVTQPAIKGNN 6
           + ++   S PLV GN+N+T   I+ N+
Sbjct: 168 AKIIEQTSSPLVQGNKNITSSRIEQNS 194


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,181,697
Number of Sequences: 27780
Number of extensions: 176174
Number of successful extensions: 406
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 406
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)