Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306A11f
         (506 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    24   0.90 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   3.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   3.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   3.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   8.4  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   8.4  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   8.4  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 0.90
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 499 YNPNLHISKNTGGQTP 452
           YNP  +I+K  GG +P
Sbjct: 282 YNPGTYINKEAGGGSP 297


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 331 VPPVPTQSPHPEILT 287
           +PP P  SPHP  L+
Sbjct: 230 IPPHPGLSPHPPHLS 244


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 331 VPPVPTQSPHPEILT 287
           +PP P  SPHP  L+
Sbjct: 122 IPPHPGLSPHPPHLS 136


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +2

Query: 83  NLSSRLIYNRLR*MYRSWNRK*LRLDYSQVRLAFFSLYVYIYT 211
           N+S+ +I N LR M+R +    LRL     +L F  L  Y  T
Sbjct: 274 NVSTEVIGNILRLMHRRFEITALRLFTIDNKLLFGVLAYYSTT 316


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 175 PCVLFTVRIYLHFIF 219
           PCV F   I + FIF
Sbjct: 234 PCVFFLGSILIFFIF 248


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/29 (34%), Positives = 11/29 (37%)
 Frame = +2

Query: 290 KNFGVRRLSWHRRDPYQNASIGPLILSVP 376
           KNF  +        PY    IGPL    P
Sbjct: 19  KNFNNKAFFCFHGIPYAKPPIGPLRFKAP 47


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 10/29 (34%), Positives = 11/29 (37%)
 Frame = +2

Query: 290 KNFGVRRLSWHRRDPYQNASIGPLILSVP 376
           KNF  +        PY    IGPL    P
Sbjct: 19  KNFNNKAFFCFHGIPYAKPPIGPLRFKAP 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,563
Number of Sequences: 336
Number of extensions: 2472
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)