Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306A10f
(472 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 28 0.050
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.62
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.62
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 24 0.62
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 3.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 3.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 3.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 3.3
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 5.7
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 5.7
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 27.9 bits (59), Expect = 0.050
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +1
Query: 211 ANSGLVQICKMAQVYPHPAPEGCTSASSESAPXDQPIYPDTG 336
A GL + ++ VYP+ C + E++ D P +P G
Sbjct: 178 ARHGLETLSQLMDVYPNNDGTKCLVVTDEASISDAPFFPHRG 219
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 24.2 bits (50), Expect = 0.62
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = -2
Query: 438 FLHLVQQ-LPQLSFCCSVSGLYFSKIL-KRPLAVVLSSVWVNW 316
FL+LV + LPQ+S + G YF+ I+ +VVL+ V +N+
Sbjct: 256 FLNLVAETLPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVLNY 298
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 24.2 bits (50), Expect = 0.62
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = -2
Query: 438 FLHLVQQ-LPQLSFCCSVSGLYFSKIL-KRPLAVVLSSVWVNW 316
FL+LV + LPQ+S + G YF+ I+ +VVL+ V +N+
Sbjct: 256 FLNLVAETLPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVLNY 298
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 24.2 bits (50), Expect = 0.62
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = -2
Query: 438 FLHLVQQ-LPQLSFCCSVSGLYFSKIL-KRPLAVVLSSVWVNW 316
FL+LV + LPQ+S + G YF+ I+ +VVL+ V +N+
Sbjct: 256 FLNLVAETLPQVSDAIPLLGTYFNCIMFMVASSVVLTVVVLNY 298
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 3.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 205 ALTNGKVLWPLLEER 161
A G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 3.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 205 ALTNGKVLWPLLEER 161
A G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 3.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 205 ALTNGKVLWPLLEER 161
A G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 3.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 205 ALTNGKVLWPLLEER 161
A G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.0 bits (42), Expect = 5.7
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +1
Query: 253 YPHP--APEGCTSASSESAPXDQPIYPDTG 336
YP+P +PE A+S P P+ P G
Sbjct: 172 YPYPILSPEMSQVAASWHTPSMYPLSPGAG 201
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.0 bits (42), Expect = 5.7
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = +1
Query: 253 YPHP--APEGCTSASSESAPXDQPIYPDTG 336
YP+P +PE A+S P P+ P G
Sbjct: 64 YPYPILSPEMSQVAASWHTPSMYPLSPGAG 93
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,355
Number of Sequences: 336
Number of extensions: 1809
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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