Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306A08f
         (379 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051696-1|AAK93120.1|  430|Drosophila melanogaster LD24073p pro...    27   6.1  
AE014296-2661|AAF49525.3|  430|Drosophila melanogaster CG5027-PA...    27   6.1  
AY075212-1|AAL68079.1|  473|Drosophila melanogaster AT15052p pro...    27   8.0  
AE014134-2786|AAF53572.2|  473|Drosophila melanogaster CG13280-P...    27   8.0  

>AY051696-1|AAK93120.1|  430|Drosophila melanogaster LD24073p
           protein.
          Length = 430

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 17/65 (26%), Positives = 30/65 (46%)
 Frame = +3

Query: 102 PESSWPFCIMEYRYLRVPGNEAMDNVLGALKFESVTEINHERQMIQMIYFCFLNHFNKNS 281
           P S W F ++    L + G+  + + +  L  +   ++ HE Q + M Y  +  +  K  
Sbjct: 3   PNSMWIFGLISALLLTL-GSTGLSSKVLELS-DRFIDVRHEGQWLVMFYAPWCGYCKKTE 60

Query: 282 PIIAL 296
           PI AL
Sbjct: 61  PIFAL 65


>AE014296-2661|AAF49525.3|  430|Drosophila melanogaster CG5027-PA
           protein.
          Length = 430

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 17/65 (26%), Positives = 30/65 (46%)
 Frame = +3

Query: 102 PESSWPFCIMEYRYLRVPGNEAMDNVLGALKFESVTEINHERQMIQMIYFCFLNHFNKNS 281
           P S W F ++    L + G+  + + +  L  +   ++ HE Q + M Y  +  +  K  
Sbjct: 3   PNSMWIFGLISALLLTL-GSTGLSSKVLELS-DRFIDVRHEGQWLVMFYAPWCGYCKKTE 60

Query: 282 PIIAL 296
           PI AL
Sbjct: 61  PIFAL 65


>AY075212-1|AAL68079.1|  473|Drosophila melanogaster AT15052p
           protein.
          Length = 473

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 105 ESSWPFCIMEYRYLRVPGNEAMDNVLGALK 194
           E  WP C+  Y YLR   ++ + N LG +K
Sbjct: 211 EGMWPRCVPAYHYLR---HQILRNRLGEIK 237


>AE014134-2786|AAF53572.2|  473|Drosophila melanogaster CG13280-PA
           protein.
          Length = 473

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 105 ESSWPFCIMEYRYLRVPGNEAMDNVLGALK 194
           E  WP C+  Y YLR   ++ + N LG +K
Sbjct: 211 EGMWPRCVPAYHYLR---HQILRNRLGEIK 237


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,062,033
Number of Sequences: 53049
Number of extensions: 214418
Number of successful extensions: 436
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1003372560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)