Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306A07f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370047-1|ABD18608.1|   89|Anopheles gambiae putative secreted ...    24   2.7  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    24   3.6  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   4.7  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   4.7  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   6.2  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   6.2  

>DQ370047-1|ABD18608.1|   89|Anopheles gambiae putative secreted
          peptide protein.
          Length = 89

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 35 TKMNRVCILLASVAIAT 85
          T + RVCILL  +A+AT
Sbjct: 3  TSIERVCILLVLLALAT 19


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 216 HIWTTKSVLDRNRGGHWTRQTSTKSSM 296
           HIW    VL  N  GH+     TK+++
Sbjct: 108 HIWRPDIVLYNNADGHYEVTLMTKATV 134


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -2

Query: 397 ESPVGSVRDLRVLEHKLRQFKLEFVGVQNPRH 302
           + P  SV+DLR+L+ K+    +       P H
Sbjct: 483 QKPPSSVQDLRILQKKVHGSVVNLAPNDGPPH 514


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +2

Query: 197 LKVKVLSYLDDKVGVGSESGRALDETNIDKVIYDRVARILDT 322
           L +K L Y+ D++    E+G    E     ++ DR+  I+ T
Sbjct: 448 LILKELRYITDQLRKEDETGEVTREWKFAAMVVDRLCLIIFT 489


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = -1

Query: 365 RFGT*TPAV*T*IRWCPKSSPPDHR*LCRCLSRPMPSPIPIQHRLCRP 222
           RF T TPA  T  R+  ++    HR L    S P P P     + C P
Sbjct: 304 RFTTRTPATSTEHRYTTRTPTTTHR-LAARTSTP-PDPETTSSQQCHP 349


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
 Frame = -2

Query: 499 FHLELQE--QQDGKQELLL*EAASFTVLVVLREFNI---ESPVGSVRDLRVLEHKL 347
           F L LQ+    D K +LL+    +  + +   ++N+   +S  G VRDLR+  +KL
Sbjct: 53  FGLTLQQIIDVDEKNQLLI---TNIWLSLEWNDYNLRWNDSEYGGVRDLRITPNKL 105


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,653
Number of Sequences: 2352
Number of extensions: 8780
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)