Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306A06f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC093004-1|AAH93004.1|   76|Homo sapiens chromosome 18 open read...    43   8e-04
BC022357-1|AAH22357.1|   76|Homo sapiens LOC497661 protein protein.    43   8e-04
AB097012-1|BAC77365.1|   76|Homo sapiens putative NFkB activatin...    43   8e-04
BC070305-1|AAH70305.1|   85|Homo sapiens SRP9 protein protein.         30   4.3  

>BC093004-1|AAH93004.1|   76|Homo sapiens chromosome 18 open reading
           frame 32 protein.
          Length = 76

 Score = 42.7 bits (96), Expect = 8e-04
 Identities = 14/31 (45%), Positives = 25/31 (80%)
 Frame = +2

Query: 110 MVCVPCFIIPLLLFLWHRFVQPYILRFWNPW 202
           MVC+PC +IP+LL+++ +F++PYI    +P+
Sbjct: 1   MVCIPCIVIPVLLWIYKKFLEPYIYPLVSPF 31


>BC022357-1|AAH22357.1|   76|Homo sapiens LOC497661 protein protein.
          Length = 76

 Score = 42.7 bits (96), Expect = 8e-04
 Identities = 14/31 (45%), Positives = 25/31 (80%)
 Frame = +2

Query: 110 MVCVPCFIIPLLLFLWHRFVQPYILRFWNPW 202
           MVC+PC +IP+LL+++ +F++PYI    +P+
Sbjct: 1   MVCIPCIVIPVLLWIYKKFLEPYIYPLVSPF 31


>AB097012-1|BAC77365.1|   76|Homo sapiens putative NFkB activating
           protein protein.
          Length = 76

 Score = 42.7 bits (96), Expect = 8e-04
 Identities = 14/31 (45%), Positives = 25/31 (80%)
 Frame = +2

Query: 110 MVCVPCFIIPLLLFLWHRFVQPYILRFWNPW 202
           MVC+PC +IP+LL+++ +F++PYI    +P+
Sbjct: 1   MVCIPCIVIPVLLWIYKKFLEPYIYPLVSPF 31


>BC070305-1|AAH70305.1|   85|Homo sapiens SRP9 protein protein.
          Length = 85

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 263 GVCVFARNKNTENSTSNEADQSEDQKTK*KE 355
           G+ +  +N+N ENS S+ +D SED+  K  E
Sbjct: 25  GLSIEEKNENDENSLSSSSDSSEDKDEKISE 55


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,788,696
Number of Sequences: 237096
Number of extensions: 1601488
Number of successful extensions: 2469
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2469
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)