Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306A06f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70684-5|CAA94600.1| 233|Caenorhabditis elegans Hypothetical pr... 34 0.071
Z70684-3|CAA94598.1| 233|Caenorhabditis elegans Hypothetical pr... 31 0.38
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81137-8|CAB03467.1| 73|Caenorhabditis elegans Hypothetical pr... 28 3.5
U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin red... 28 3.5
AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin r... 28 3.5
AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin r... 28 3.5
Z82284-6|CAE17979.1| 342|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z82287-2|CAB05312.1| 502|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 27 8.1
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 27 8.1
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 27 8.1
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 27 8.1
>Z70684-5|CAA94600.1| 233|Caenorhabditis elegans Hypothetical
protein F28D1.5 protein.
Length = 233
Score = 33.9 bits (74), Expect = 0.071
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -3
Query: 249 NGNSVFITLPSLSFTAHGFQKRKIYGCTNRCHKNKSSGIMKHGTQTIFIYNYFFGSITY 73
NGN+V L + R YG ++CH++ ++ + K T + Y Y GS T+
Sbjct: 162 NGNTVACKSGCLGYNTDQECCRGAYGTPDKCHRSATAQMFKDACPTAYSYAYDDGSSTF 220
>Z70684-3|CAA94598.1| 233|Caenorhabditis elegans Hypothetical
protein F28D1.3 protein.
Length = 233
Score = 31.5 bits (68), Expect = 0.38
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = -3
Query: 249 NGNSVFITLPSLSFTAHGFQKRKIYGCTNRCHKNKSSGIMKHGTQTIFIYNYFFGSITY 73
NG +V L + R YG ++CH++ ++ + K T + Y Y GS T+
Sbjct: 162 NGKTVACKSGCLGYNTDQECCRGAYGTPDKCHRSATAQMFKDACPTAYSYAYDDGSSTF 220
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +2
Query: 275 FARNKNTENSTSNEADQSEDQ---KTK*KENNTPR 370
F R ++ NS SNE+ S+DQ +T+ +E + PR
Sbjct: 1424 FVRRPHSRNSYSNESTSSDDQMNYRTRSRERSLPR 1458
>Z81137-8|CAB03467.1| 73|Caenorhabditis elegans Hypothetical
protein W02D9.9 protein.
Length = 73
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +1
Query: 100 INKYGLCSMFHYTTTFVFMASICAAVYFTLLESMGCKRQGRQRNENR 240
+ K L S+F++ F+ S+CA+VY + R R R +
Sbjct: 4 VGKILLLSLFYHLAVFLCACSVCASVYLNVDNVEERVRNARMRESRK 50
>U61947-1|AAB03136.3| 667|Caenorhabditis elegans Thioredoxin
reductase protein 1 protein.
Length = 667
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 177 YGCTNRCHKNKSSGIMKHGTQTIFIYNYFFGSITYAL 67
YGC C ++ +MK+G I IY+ F + Y +
Sbjct: 546 YGC---CGLSEEDAMMKYGKDNIIIYHNVFNPLEYTI 579
>AF162693-1|AAD46625.1| 525|Caenorhabditis elegans thioredoxin
reductase homolog protein.
Length = 525
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 177 YGCTNRCHKNKSSGIMKHGTQTIFIYNYFFGSITYAL 67
YGC C ++ +MK+G I IY+ F + Y +
Sbjct: 404 YGC---CGLSEEDAMMKYGKDNIIIYHNVFNPLEYTI 437
>AF148217-1|AAD41826.1| 667|Caenorhabditis elegans thioredoxin
reductase protein.
Length = 667
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 177 YGCTNRCHKNKSSGIMKHGTQTIFIYNYFFGSITYAL 67
YGC C ++ +MK+G I IY+ F + Y +
Sbjct: 546 YGC---CGLSEEDAMMKYGKDNIIIYHNVFNPLEYTI 579
>Z82284-6|CAE17979.1| 342|Caenorhabditis elegans Hypothetical
protein T27E7.9 protein.
Length = 342
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 97 LFFRFYYICTFRNVLIIPNFVFFTIW 20
L+FRF + F +L+IP +F T W
Sbjct: 89 LYFRFPHFYIFEFLLLIPLAIFVTTW 114
>Z82287-2|CAB05312.1| 502|Caenorhabditis elegans Hypothetical
protein ZK550.2 protein.
Length = 502
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +1
Query: 76 CNRTEKIIINKYGLCSMFHYTTTFVFMASICAAVYFTLLESMGCKRQG 219
CN T ++ + Y +F + F F+ S AA+Y E +G ++QG
Sbjct: 380 CNTTTRVPMALYIFAFVFFFGIAFPFVESPAAALY---SEILGPRKQG 424
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 122 EHKPYLFIIIFSVLLHMHF*ECFNNSQFCIFYYLDLKK 9
+ PY+F+ I + +H CF N QFC D K
Sbjct: 58 DRSPYIFVEIKTATIHDCINSCFGN-QFCYSLKYDQSK 94
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 122 EHKPYLFIIIFSVLLHMHF*ECFNNSQFCIFYYLDLKK 9
+ PY+F+ I + +H CF N QFC D K
Sbjct: 58 DRSPYIFVEIKTATIHDCINSCFGN-QFCYSLKYDQSK 94
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 122 EHKPYLFIIIFSVLLHMHF*ECFNNSQFCIFYYLDLKK 9
+ PY+F+ I + +H CF N QFC D K
Sbjct: 58 DRSPYIFVEIKTATIHDCINSCFGN-QFCYSLKYDQSK 94
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 122 EHKPYLFIIIFSVLLHMHF*ECFNNSQFCIFYYLDLKK 9
+ PY+F+ I + +H CF N QFC D K
Sbjct: 58 DRSPYIFVEIKTATIHDCINSCFGN-QFCYSLKYDQSK 94
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 122 EHKPYLFIIIFSVLLHMHF*ECFNNSQFCIFYYLDLKK 9
+ PY+F+ I + +H CF N QFC D K
Sbjct: 58 DRSPYIFVEIKTATIHDCINSCFGN-QFCYSLKYDQSK 94
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 122 EHKPYLFIIIFSVLLHMHF*ECFNNSQFCIFYYLDLKK 9
+ PY+F+ I + +H CF N QFC D K
Sbjct: 58 DRSPYIFVEIKTATIHDCINSCFGN-QFCYSLKYDQSK 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,332,133
Number of Sequences: 27780
Number of extensions: 269355
Number of successful extensions: 784
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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