Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306A05f
(457 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 3e-17
SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 3e-17
SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0) 85 3e-17
SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0) 85 3e-17
SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29) 67 7e-12
SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037) 61 5e-10
SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10) 51 5e-07
SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05) 34 0.064
SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18) 34 0.064
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 31 0.45
SB_59125| Best HMM Match : DUF1309 (HMM E-Value=4.2) 29 1.4
SB_35739| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_48559| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38) 27 7.4
SB_46699| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38) 27 7.4
SB_9200| Best HMM Match : Peptidase_A17 (HMM E-Value=4.4e-39) 27 7.4
SB_7389| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38) 27 7.4
SB_57365| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_33021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 84.6 bits (200), Expect = 3e-17
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>SB_57838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 84.6 bits (200), Expect = 3e-17
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 84.6 bits (200), Expect = 3e-17
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 84.6 bits (200), Expect = 3e-17
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 84.6 bits (200), Expect = 3e-17
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 84.6 bits (200), Expect = 3e-17
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 84.6 bits (200), Expect = 3e-17
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456
Score = 84.6 bits (200), Expect = 3e-17
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532
>SB_46051| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 381
Score = 84.6 bits (200), Expect = 3e-17
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 84.6 bits (200), Expect = 3e-17
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 84.6 bits (200), Expect = 3e-17
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 84.6 bits (200), Expect = 3e-17
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 84.6 bits (200), Expect = 3e-17
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
>SB_25984| Best HMM Match : ubiquitin (HMM E-Value=0)
Length = 147
Score = 84.6 bits (200), Expect = 3e-17
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 48.0 bits (109), Expect = 4e-06
Identities = 24/71 (33%), Positives = 38/71 (53%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VK K +D+E +D GIPP+ QRL++ +++ D ++ DY
Sbjct: 77 MQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYN 135
Query: 328 VQGGSVLHLVL 360
++ GS+LHL L
Sbjct: 136 IKQGSILHLFL 146
>SB_28758| Best HMM Match : ubiquitin (HMM E-Value=1.5e-29)
Length = 142
Score = 66.9 bits (156), Expect = 7e-12
Identities = 31/62 (50%), Positives = 39/62 (62%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++EP+D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 79 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 138
Query: 328 VQ 333
+Q
Sbjct: 139 IQ 140
>SB_20850| Best HMM Match : ubiquitin (HMM E-Value=0.00037)
Length = 150
Score = 60.9 bits (141), Expect = 5e-10
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +1
Query: 253 IPPQQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLVLALRGG 375
IPP QQRLIF+GKQ+ D +T DY +Q S LHLVL LRGG
Sbjct: 2 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 42
>SB_41074| Best HMM Match : ubiquitin (HMM E-Value=2.3e-10)
Length = 333
Score = 50.8 bits (116), Expect = 5e-07
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +1
Query: 154 IKVKTLTGKEIEIDIE-PTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYKV 330
I V TLTG+ I I + P G P QQRL+F+G+ ++DE T + +
Sbjct: 73 IAVLTLTGERILIPFKSPKHTIIEVKYLIEAKGGYPKDQQRLVFNGQVLSDEDTFEKVGI 132
Query: 331 QGGSVLHLVLALRGGE 378
G+ LHL++ L GGE
Sbjct: 133 FAGATLHLIVRLLGGE 148
>SB_10325| Best HMM Match : ubiquitin (HMM E-Value=3.4e-05)
Length = 198
Score = 33.9 bits (74), Expect = 0.064
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 250 GIPPQQQRLIFSGKQMNDEKTAQDY 324
GIP ++QRLIF GK + DEK +++
Sbjct: 21 GIPAERQRLIFKGKVLQDEKKLKEF 45
>SB_1375| Best HMM Match : Extensin_2 (HMM E-Value=0.18)
Length = 796
Score = 33.9 bits (74), Expect = 0.064
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 250 GIPPQQQRLIFSGKQMNDEKTAQDY 324
GIP ++QRLIF GK + DEK +++
Sbjct: 1 GIPAERQRLIFKGKVLQDEKKLKEF 25
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 31.1 bits (67), Expect = 0.45
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +1
Query: 130 NYNSFKMLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXG---IPPQQQRLIFSGKQMN 300
N S M+I KTL + +++I + G P +LI++GK +N
Sbjct: 61 NIKSVNMIITFKTLQQQTFKVEIGEDETVLKLKQKIEADKGKDAYPHGNIKLIYAGKILN 120
Query: 301 DEKTAQDYKVQGGSVLHLVLA 363
D+ ++Y + S + +++A
Sbjct: 121 DDNPLKEYNIDEKSFVVIMVA 141
>SB_59125| Best HMM Match : DUF1309 (HMM E-Value=4.2)
Length = 187
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 7 RIRHEGRTALLLEKWSKIKK*LVYNFILSRSNLSPCYITINN 132
R+ H+ A SK K+ N+ILS++ SPC+ TIN+
Sbjct: 7 RVAHDNNVAACAAFRSKSKR----NWILSQAGPSPCHYTIND 44
>SB_35739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 654
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +1
Query: 277 IFSGKQMNDEKTAQDYKVQGGSVLHLVLALRGGE 378
+ G +ND+ + + ++ +VL LVL ++GGE
Sbjct: 273 VMRGPDINDDGSHERESLRANAVLPLVLRMKGGE 306
>SB_48559| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38)
Length = 1541
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 79 NFILSRSNLSPC-YITINNYNSFKMLIKVKTLTGKEIEIDIEPT 207
+F++++S ++P ITI +I V + E+E+D++PT
Sbjct: 680 SFLMAKSRVAPLKQITIPRLELTAAVISVNVSSMVELELDLQPT 723
>SB_46699| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38)
Length = 517
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 79 NFILSRSNLSPC-YITINNYNSFKMLIKVKTLTGKEIEIDIEPT 207
+F++++S ++P ITI +I V + E+E+D++PT
Sbjct: 338 SFLMAKSRVAPLKQITIPRLELTAAVISVNVSSMVELELDLQPT 381
>SB_9200| Best HMM Match : Peptidase_A17 (HMM E-Value=4.4e-39)
Length = 1607
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 79 NFILSRSNLSPC-YITINNYNSFKMLIKVKTLTGKEIEIDIEPT 207
+F++++S ++P ITI +I V + E+E+D++PT
Sbjct: 1280 SFLMAKSRVAPLKQITIPRLELTAAVISVNVSSMVELELDLQPT 1323
>SB_7389| Best HMM Match : Peptidase_A17 (HMM E-Value=2e-38)
Length = 308
Score = 27.1 bits (57), Expect = 7.4
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 79 NFILSRSNLSPC-YITINNYNSFKMLIKVKTLTGKEIEIDIEPT 207
+F++++S ++P ITI +I V + E+E+D++PT
Sbjct: 129 SFLMAKSRVAPLKQITIPRLELTAAVISVNVSSMVELELDLQPT 172
>SB_57365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 404 KENYHKPDHSPPLKAKTR 351
KE +H PD +PP K TR
Sbjct: 61 KEEHHTPDFNPPPKPATR 78
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 10 IRHEGRTALLLEKWSKIKK*LVYNFILSRSNLSPCYITINNYNSFKMLIKVK 165
++H R LLL+ W ++K V + +S L C T FK+ +K K
Sbjct: 278 VKHLSRNYLLLQ-WDLLEKGRVTHCFKGKSILYQCETTDEALKRFKLEVKCK 328
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,424,051
Number of Sequences: 59808
Number of extensions: 181571
Number of successful extensions: 516
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 516
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 920703675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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