Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306A05f
         (457 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.     85   1e-18
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    22   8.9  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    22   8.9  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score = 84.6 bits (200), Expect = 1e-18
 Identities = 41/76 (53%), Positives = 49/76 (64%)
 Frame = +1

Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
           M I VKTLTGK I +++EP+D             GIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 328 VQGGSVLHLVLALRGG 375
           +Q  S LHLVL LRGG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score = 84.6 bits (200), Expect = 1e-18
 Identities = 41/76 (53%), Positives = 49/76 (64%)
 Frame = +1

Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
           M I VKTLTGK I +++EP+D             GIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 328 VQGGSVLHLVLALRGG 375
           +Q  S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score = 84.6 bits (200), Expect = 1e-18
 Identities = 41/76 (53%), Positives = 49/76 (64%)
 Frame = +1

Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
           M I VKTLTGK I +++EP+D             GIPP QQRLIF+GKQ+ D +T  DY 
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 328 VQGGSVLHLVLALRGG 375
           +Q  S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 22.2 bits (45), Expect = 8.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 219 KNQRKSRRKGRHSAAATASHIF 284
           +  RKSRR  RH+ +A  S IF
Sbjct: 202 QKNRKSRRVTRHNWSAIYSLIF 223


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 22.2 bits (45), Expect = 8.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 219 KNQRKSRRKGRHSAAATASHIF 284
           +  RKSRR  RH+ +A  S IF
Sbjct: 203 QKNRKSRRVTRHNWSAIYSLIF 224


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,139
Number of Sequences: 2352
Number of extensions: 5902
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39119412
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)