Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306A05f
(457 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 107 3e-24
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 107 4e-24
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 84 5e-17
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 81 3e-16
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 81 3e-16
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 81 3e-16
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 81 3e-16
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 81 3e-16
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 81 3e-16
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 81 3e-16
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 81 3e-16
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 81 3e-16
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 81 3e-16
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 81 3e-16
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 81 3e-16
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 81 3e-16
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 81 3e-16
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 81 3e-16
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 81 3e-16
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 81 3e-16
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 81 3e-16
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 81 3e-16
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 81 3e-16
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 71 3e-13
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 66 1e-11
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 43 9e-05
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 42 1e-04
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 41 5e-04
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 39 0.001
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 39 0.001
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 38 0.003
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 37 0.006
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 37 0.007
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 37 0.007
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 37 0.007
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 36 0.010
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 36 0.017
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 35 0.023
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 34 0.040
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 34 0.052
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 34 0.052
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 34 0.052
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 31 0.37
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 31 0.49
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 29 1.1
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 29 1.1
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 29 1.1
At5g14470.1 68418.m01693 GHMP kinase-related contains similarity... 29 1.5
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 29 2.0
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 29 2.0
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 27 4.5
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 27 4.5
At3g11520.1 68416.m01404 cyclin, putative (CYC2) similar to cycl... 27 7.9
At1g22850.1 68414.m02853 expressed protein 27 7.9
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 107 bits (258), Expect = 3e-24
Identities = 51/75 (68%), Positives = 59/75 (78%)
Frame = +1
Query: 151 LIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYKV 330
+IKVKTLTGKEIEIDIEPTD GIPP QQRLI++GKQ+ D+KTA+DY +
Sbjct: 78 MIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNI 137
Query: 331 QGGSVLHLVLALRGG 375
+GGSVLHLVLALRGG
Sbjct: 138 EGGSVLHLVLALRGG 152
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 107 bits (257), Expect = 4e-24
Identities = 51/75 (68%), Positives = 59/75 (78%)
Frame = +1
Query: 151 LIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYKV 330
+IKVKTLTGKEIEIDIEPTD GIPP QQRLI++GKQ+ D+KTA+DY +
Sbjct: 78 MIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAI 137
Query: 331 QGGSVLHLVLALRGG 375
+GGSVLHLVLALRGG
Sbjct: 138 EGGSVLHLVLALRGG 152
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 83.8 bits (198), Expect = 5e-17
Identities = 41/76 (53%), Positives = 53/76 (69%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M IKVKTLT K+I+I+IE TD GIPP QR++++GKQ+ D+ TA+ Y
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 328 VQGGSVLHLVLALRGG 375
++ GSVLHLVLALRGG
Sbjct: 61 LERGSVLHLVLALRGG 76
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 81.0 bits (191), Expect = 3e-16
Identities = 39/76 (51%), Positives = 49/76 (64%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D G+PP QQRLIF+GKQ++D +T DY
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 139 IQKESTLHLVLRLRGG 154
Score = 73.3 bits (172), Expect = 7e-14
Identities = 37/76 (48%), Positives = 46/76 (60%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I V+TLT K I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL L GG
Sbjct: 215 IQKESTLHLVLRLCGG 230
Score = 71.3 bits (167), Expect = 3e-13
Identities = 37/76 (48%), Positives = 44/76 (57%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I KTLT K I ID+ +D GIP QQRLIFSGK ++D +T DY
Sbjct: 3 MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYS 62
Query: 328 VQGGSVLHLVLALRGG 375
+Q S+LHL L LRGG
Sbjct: 63 IQKDSILHLALRLRGG 78
Score = 68.5 bits (160), Expect = 2e-12
Identities = 41/90 (45%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMND-EKTAQDY 324
M I V TLTGK I +++E +D I P QQRLIF+G+Q+ D T DY
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290
Query: 325 KVQGGSVLHLVLALRGGE*SGL**FSFVFI 414
+Q S LHLVL LRGGE G F F+F+
Sbjct: 291 NIQKESTLHLVLRLRGGECFG---FIFLFL 317
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTD 210
M I VKTLTGK I +++E +D
Sbjct: 229 MQIFVKTLTGKTITLEVESSD 249
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTD 210
M I VKTLTGK I +++E +D
Sbjct: 381 MQIFVKTLTGKTITLEVESSD 401
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTD 210
M I VKTLTGK I +++E +D
Sbjct: 305 MQIFVKTLTGKTITLEVESSD 325
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTD 210
M I VKTLTGK I +++E +D
Sbjct: 381 MQIFVKTLTGKTITLEVESSD 401
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTD 210
M I VKTLTGK I +++E +D
Sbjct: 305 MQIFVKTLTGKTITLEVESSD 325
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 77.8 bits (183), Expect = 3e-15
Identities = 39/76 (51%), Positives = 47/76 (61%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D IPP QQRLIF+GKQ+ D +T DY
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 212 IQKESTLHLVLRLRGG 227
Score = 73.7 bits (173), Expect = 5e-14
Identities = 39/76 (51%), Positives = 47/76 (61%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T D
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 136 IQKESTLHLVLRLRGG 151
Score = 48.4 bits (110), Expect = 2e-06
Identities = 24/50 (48%), Positives = 30/50 (60%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQM 297
M I VKTLTGK I +++E + GIPP QQRLIF+GKQ+
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 277
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152
Score = 76.2 bits (179), Expect = 1e-14
Identities = 39/76 (51%), Positives = 46/76 (60%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GI P QQRLIF+GKQ D +T DY
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228
Score = 72.5 bits (170), Expect = 1e-13
Identities = 36/76 (47%), Positives = 45/76 (59%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I +KTLTGK +++E +D GIPP Q RLIF+GKQ+ D +T DY
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 328 VQGGSVLHLVLALRGG 375
VQ S LHL+L RGG
Sbjct: 61 VQEDSTLHLLLRFRGG 76
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 81.0 bits (191), Expect = 3e-16
Identities = 40/76 (52%), Positives = 48/76 (63%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VKTLTGK I +++E +D GIPP QQRLIF+GKQ+ D +T DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL LRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 71.3 bits (167), Expect = 3e-13
Identities = 37/74 (50%), Positives = 43/74 (58%)
Frame = +1
Query: 154 IKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYKVQ 333
I KTLT K I +D+E +D GIP QQRLIF+GKQ+ D T DY +Q
Sbjct: 5 IYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYNIQ 64
Query: 334 GGSVLHLVLALRGG 375
S LHLVL LRGG
Sbjct: 65 KESTLHLVLRLRGG 78
Score = 70.9 bits (166), Expect = 4e-13
Identities = 36/76 (47%), Positives = 47/76 (61%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I V+TLTGK I ++++ +D GI P+QQRLIF+GKQ+ D +T DY
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138
Query: 328 VQGGSVLHLVLALRGG 375
+Q S LHLVL L GG
Sbjct: 139 IQKESTLHLVLRLCGG 154
Score = 59.7 bits (138), Expect = 9e-10
Identities = 32/74 (43%), Positives = 41/74 (55%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I +KTLTGK I +++E +D GI P QQ LIF G+Q+ D T DY
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYD 611
Query: 328 VQGGSVLHLVLALR 369
+ S L+LVL LR
Sbjct: 612 IHKKSTLYLVLRLR 625
Score = 57.2 bits (132), Expect = 5e-09
Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQ--QRLIFSGKQMNDEKTAQD 321
M I VKTLT K I +++E D GI PQ QRLIF GK++ D T D
Sbjct: 319 MQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLAD 378
Query: 322 YKVQGGSVLHLVLALR 369
Y +Q S LHLVL ++
Sbjct: 379 YSIQKESTLHLVLGMQ 394
Score = 50.8 bits (116), Expect = 4e-07
Identities = 27/76 (35%), Positives = 37/76 (48%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I VK GK I +++ +D G PP QQ L+F G Q+ D +T DY
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 328 VQGGSVLHLVLALRGG 375
++ S LHL +R G
Sbjct: 453 IRNESTLHLFFHIRHG 468
Score = 50.8 bits (116), Expect = 4e-07
Identities = 25/71 (35%), Positives = 37/71 (52%)
Frame = +1
Query: 163 KTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYKVQGGS 342
+T T K I +++E +D GIP +QRLIF G+ + +T DY +Q GS
Sbjct: 481 ETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGS 540
Query: 343 VLHLVLALRGG 375
+H + RGG
Sbjct: 541 TIHQLFLQRGG 551
Score = 42.7 bits (96), Expect = 1e-04
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 163 KTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQM--NDEKTAQDYKVQG 336
K T + + +E +D G+ P QRLIF G+++ D +T DY ++
Sbjct: 165 KNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDNRTLADYGIRN 224
Query: 337 GSVLHLVLALRG 372
S L L L LRG
Sbjct: 225 RSTLCLALRLRG 236
Score = 42.7 bits (96), Expect = 1e-04
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +1
Query: 166 TLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYKVQGGSV 345
+ TG+ +++E +D IP RLIF+GK + +T Y +Q GS
Sbjct: 249 SFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGST 308
Query: 346 LHLVLALRGG 375
L+LV R G
Sbjct: 309 LYLVTRFRCG 318
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 66.1 bits (154), Expect = 1e-11
Identities = 32/73 (43%), Positives = 41/73 (56%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M I +KTLTG+ I +++E D GIP QQRLIF GKQ+ D T DY
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYN 145
Query: 328 VQGGSVLHLVLAL 366
+Q S+LHL+ L
Sbjct: 146 IQNDSILHLIKRL 158
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 43.2 bits (97), Expect = 9e-05
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +1
Query: 154 IKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYKVQ 333
+ +KTL + + + G+P QQRLIF G+ + D+ +Y ++
Sbjct: 26 LNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYHLE 85
Query: 334 GGSVLHLVL 360
G LHL++
Sbjct: 86 NGHTLHLIV 94
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 42.3 bits (95), Expect = 1e-04
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 121 TINNYNSFKMLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQM- 297
T +Y S K ++ +++G + + I +D G ++Q+L+FSG+++
Sbjct: 26 TTTHY-SVKSVLVFLSVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELA 84
Query: 298 NDEKTAQDYKVQGGSVLHLVLAL 366
+ +DY V GGSVLHLVL L
Sbjct: 85 RNASRVKDYGVTGGSVLHLVLKL 107
Score = 27.1 bits (57), Expect = 6.0
Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPT-DXXXXXXXXXXXXXGIPP-QQQRLIFSGKQMNDEKTAQD 321
+L+ V T GK + ++ + G P Q ++F G++++D +
Sbjct: 111 LLVTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDG 170
Query: 322 YKVQGGSVLHLVL 360
G SV+HL++
Sbjct: 171 ICKDGNSVIHLLV 183
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 40.7 bits (91), Expect = 5e-04
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXG--IPPQQQRLIFSGKQMNDEKTAQD 321
M I VKTL+G EI+++P D G P +Q LI GK + DE T ++
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 322 YKVQGGSVLHLVLALRGGE*SG 387
V S + ++L+ SG
Sbjct: 61 NNVVENSFIVIMLSKTKASPSG 82
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 39.1 bits (87), Expect = 0.001
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXG---IPPQQQRLIFSGKQMNDEKTAQ 318
M I VKTL G EI+++P D G P +Q LI GK + DE T +
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 319 DYKVQGGSVLHLVL 360
+ KV S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 39.1 bits (87), Expect = 0.001
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXG---IPPQQQRLIFSGKQMNDEKTAQ 318
M I VKTL G EI+++P D G P +Q LI GK + DE T +
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 319 DYKVQGGSVLHLVL 360
+ KV S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 37.9 bits (84), Expect = 0.003
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGK 291
M+I +KTLTG+ +++ +D GIP +QQRLIF G+
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGR 97
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 37.1 bits (82), Expect = 0.006
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 154 IKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQ-RLIFSGKQMNDEKTAQDYKV 330
IK+K L + +E T G+ P++Q RL+F G+ + +++ DY V
Sbjct: 13 IKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDYHV 72
Query: 331 QGGSVLHLV 357
+ G L+LV
Sbjct: 73 EEGHTLYLV 81
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 36.7 bits (81), Expect = 0.007
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 127 NNYNSFKMLIKVKTLTG-KEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMND 303
N S ++ I V+ ++G K I I E D IP +QR+I+ GKQ+
Sbjct: 88 NRPESTRLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQR 147
Query: 304 EKTAQDYKVQGGSVLHLVLALRGGE 378
E + Y ++ + L LV ++ E
Sbjct: 148 ENSLTYYSIEQDASLQLVARMQSTE 172
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 36.7 bits (81), Expect = 0.007
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 166 TLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQM-NDEKTAQDYKVQGGS 342
TL G I + + +D G + Q+L+F G+++ +DY V G+
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 343 VLHLVLAL 366
+LHLVL L
Sbjct: 100 ILHLVLKL 107
Score = 31.1 bits (67), Expect = 0.37
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +1
Query: 151 LIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXG--IPPQQQRLIFSGKQMNDEKTAQDY 324
++ VKT GK +E G + P +Q +++ G+++ D+ D
Sbjct: 112 VLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDI 171
Query: 325 KVQGGSVLHLVL 360
SVLHL++
Sbjct: 172 CRNDDSVLHLLV 183
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 36.7 bits (81), Expect = 0.007
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 166 TLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQM-NDEKTAQDYKVQGGS 342
TL G I + + +D G + Q+L+F G+++ +DY V G+
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 343 VLHLVLAL 366
+LHLVL L
Sbjct: 100 ILHLVLKL 107
Score = 31.1 bits (67), Expect = 0.37
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +1
Query: 151 LIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXG--IPPQQQRLIFSGKQMNDEKTAQDY 324
++ VKT GK +E G + P +Q +++ G+++ D+ D
Sbjct: 112 VLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDI 171
Query: 325 KVQGGSVLHLVL 360
SVLHL++
Sbjct: 172 CRNDDSVLHLLV 183
>At5g16090.1 68418.m01880 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 142
Score = 36.3 bits (80), Expect = 0.010
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXG---IPPQQQRLIFSGKQMNDEKTAQ 318
M I VKTL G EI+++P D G P QQ LI +++ DE T +
Sbjct: 1 MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60
Query: 319 DYKVQGGSVLHLVL 360
KV SV+ +++
Sbjct: 61 ANKVFDKSVIAIII 74
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 35.5 bits (78), Expect = 0.017
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 253 IPPQQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLV 357
+P QQRLI+ G+ + D++T Y +Q +H+V
Sbjct: 53 VPANQQRLIYKGRILKDDQTLLSYGLQADHTIHMV 87
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 35.1 bits (77), Expect = 0.023
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 253 IPPQQQRLIFSGKQMNDEKTAQDYKVQGGSVLHLV 357
+P QQRLI+ G+ + D++T Y +Q +H+V
Sbjct: 53 VPANQQRLIYKGRILKDDQTLLSYGLQADHTVHMV 87
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 34.3 bits (75), Expect = 0.040
Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTD---XXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQ 318
M + VKTL G EI + PTD P QQ LI +GK + DE T
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 319 DYKVQGGSVLHLVLA 363
+ KV L ++L+
Sbjct: 61 ENKVTEEGFLVVMLS 75
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 33.9 bits (74), Expect = 0.052
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXG---IPPQQQRLIFSGKQMNDEKTAQ 318
M + VKTL G EI + P+D G P QQ LI +GK + DE +
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 319 DYKV--QGGSVLHLVLALRGG 375
+ KV +G V+ L + GG
Sbjct: 61 ENKVTEEGFLVVMLSKSKSGG 81
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 33.9 bits (74), Expect = 0.052
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXG---IPPQQQRLIFSGKQMNDEKTAQ 318
M + VKTL G EI + P+D G P QQ LI +GK + DE +
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 319 DYKV--QGGSVLHLVLALRGG 375
+ KV +G V+ L + GG
Sbjct: 61 ENKVTEEGFLVVMLSKSKSGG 81
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 33.9 bits (74), Expect = 0.052
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXG---IPPQQQRLIFSGKQMNDEKTAQ 318
M + VKTL G EI + P+D G P QQ LI +GK + DE +
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 319 DYKV--QGGSVLHLVLALRGG 375
+ KV +G V+ L + GG
Sbjct: 61 ENKVTEEGFLVVMLSKSKSGG 81
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 31.1 bits (67), Expect = 0.37
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +1
Query: 151 LIKVKTLTGKEI-EIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEK 309
LI ++ T ++ IE T G+ P+QQRL+F GK+ D +
Sbjct: 69 LISIRVSTFAHFHDLSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKEREDHE 122
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 30.7 bits (66), Expect = 0.49
Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +1
Query: 166 TLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMN-DEKTAQDYKVQGGS 342
T+ G I + +D G ++Q+L++ G++++ ++ +DY + G
Sbjct: 38 TIAGSVIPKRVMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGK 97
Query: 343 VLHLVLAL 366
+LHLV+ L
Sbjct: 98 LLHLVIRL 105
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = +1
Query: 154 IKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYKVQ 333
++V T++ EI I+ GI ++QRL+F GK+ D + V
Sbjct: 81 LRVSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKEREDREYLHMIGVG 140
Query: 334 GGSVLHLV 357
G + L+
Sbjct: 141 DGDKVFLL 148
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +1
Query: 271 RLIFSGKQMNDEKTAQDYKVQGGSVLHLV 357
++ + GK++ DEK+ + VQ S++HL+
Sbjct: 542 KMFYMGKELEDEKSLAEQNVQPNSLVHLL 570
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +1
Query: 271 RLIFSGKQMNDEKTAQDYKVQGGSVLHLV 357
++ + GK+++DEK+ VQ S++HL+
Sbjct: 703 KMFYKGKELDDEKSLAAQNVQPNSLVHLI 731
>At5g14470.1 68418.m01693 GHMP kinase-related contains similarity to
D-glycero-D-manno-heptose 7-phosphate kinase
[Aneurinibacillus thermoaerophilus]
gi|13491143|gb|AAK27850
Length = 272
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 7 RIRHEGRTALLLEKWSKIKK*LVYNFILSRS 99
++ EGRTALL + +S +K+ + NF L RS
Sbjct: 162 KLAEEGRTALLKKDYSNLKELMNRNFDLRRS 192
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 28.7 bits (61), Expect = 2.0
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M + V+ +G IDI D IP +Q + F GK + D ++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 328 VQGGSVLHLVLA 363
+ +LHL ++
Sbjct: 61 ILQNPLLHLSIS 72
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 28.7 bits (61), Expect = 2.0
Identities = 18/67 (26%), Positives = 27/67 (40%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M + + T TG I I+ + GIP +Q L GK + D+ DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 328 VQGGSVL 348
+ S+L
Sbjct: 61 ILFESLL 67
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 27.5 bits (58), Expect = 4.5
Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +1
Query: 175 GKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGK---QMNDEKTAQDYKVQGGSV 345
GK+ +++E T G+ Q L GK +++ T DYK++ +
Sbjct: 10 GKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMDDYKIKACDI 69
Query: 346 LHLVLALRGG 375
H+ +RGG
Sbjct: 70 FHMSDRMRGG 79
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 27.5 bits (58), Expect = 4.5
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = +1
Query: 148 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXXGIPPQQQRLIFSGKQMNDEKTAQDYK 327
M + + T TG I I+ + GIP +Q L GK + D+ DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 328 V 330
+
Sbjct: 61 I 61
>At3g11520.1 68416.m01404 cyclin, putative (CYC2) similar to cyclin
[Arabidopsis thaliana] GI:1360646; contains Pfam
profiles PF00134: Cyclin, N-terminal domain, PF02984:
Cyclin, C-terminal domain; identical to cDNA cyclin box
(cyc2) partial cds GI:456019
Length = 414
Score = 26.6 bits (56), Expect = 7.9
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 115 YITINNYNSFKMLIKVKTLTG 177
Y+T N+YNS ++L+ KT+ G
Sbjct: 260 YVTDNSYNSRQILVMEKTILG 280
>At1g22850.1 68414.m02853 expressed protein
Length = 344
Score = 26.6 bits (56), Expect = 7.9
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 256 PPQQQRLIFSGKQMNDEKTAQDYK 327
PPQ R F+ K NDE D K
Sbjct: 68 PPQSLRWFFNSKSTNDENDEDDVK 91
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,185,533
Number of Sequences: 28952
Number of extensions: 136270
Number of successful extensions: 426
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 752336160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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