Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306A04f
(521 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16PA2 Cluster: Putative uncharacterized protein; n=1; ... 100 2e-20
UniRef50_UPI0000DB72E5 Cluster: PREDICTED: similar to CG14464-PA... 99 7e-20
UniRef50_A0NBN7 Cluster: ENSANGP00000030250; n=1; Anopheles gamb... 88 1e-16
UniRef50_UPI0000586FB3 Cluster: PREDICTED: hypothetical protein;... 87 2e-16
UniRef50_A7RZF3 Cluster: Predicted protein; n=1; Nematostella ve... 77 2e-13
UniRef50_Q3UKZ7 Cluster: Blastocyst blastocyst cDNA, RIKEN full-... 74 2e-12
UniRef50_UPI0000F2E9C9 Cluster: PREDICTED: hypothetical protein;... 71 1e-11
UniRef50_Q0P4A1 Cluster: Zgc:153243; n=3; Clupeocephala|Rep: Zgc... 69 7e-11
UniRef50_Q8N8R7 Cluster: Uncharacterized protein C11orf46; n=19;... 69 7e-11
UniRef50_Q86E94 Cluster: Clone ZZD690 mRNA sequence; n=1; Schist... 69 9e-11
UniRef50_UPI0000F2E9C8 Cluster: PREDICTED: hypothetical protein;... 66 3e-10
UniRef50_Q8MRI3 Cluster: LD29015p; n=1; Drosophila melanogaster|... 64 2e-09
UniRef50_Q61LB7 Cluster: Putative uncharacterized protein CBG089... 55 9e-07
UniRef50_Q3Y413 Cluster: Putative uncharacterized protein; n=2; ... 53 5e-06
UniRef50_UPI0000D55B19 Cluster: PREDICTED: similar to CG15011-PA... 38 0.14
UniRef50_A2EC80 Cluster: Zinc finger in N-recognin family protei... 36 0.43
UniRef50_Q9PPW3 Cluster: Conserved hypothetical; n=1; Ureaplasma... 35 1.3
UniRef50_A5K2I1 Cluster: Putative uncharacterized protein; n=1; ... 33 3.0
UniRef50_Q59NX5 Cluster: Potential fungal zinc cluster transcrip... 33 3.0
UniRef50_Q7T7N5 Cluster: Polyprotein; n=24; Potyvirus|Rep: Polyp... 32 6.9
UniRef50_A3ESF7 Cluster: Organic solvent tolerance protein OstA;... 32 6.9
UniRef50_Q6IIK0 Cluster: HDC17821; n=1; Drosophila melanogaster|... 32 6.9
UniRef50_A1DFT8 Cluster: NF-X1 finger and helicase protein, puta... 32 6.9
UniRef50_UPI000150A2C7 Cluster: hypothetical protein TTHERM_0013... 32 9.2
UniRef50_A7S7B8 Cluster: Predicted protein; n=1; Nematostella ve... 32 9.2
UniRef50_A0CAJ0 Cluster: Chromosome undetermined scaffold_161, w... 32 9.2
UniRef50_Q6C014 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 32 9.2
>UniRef50_Q16PA2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 167
Score = 100 bits (240), Expect = 2e-20
Identities = 43/77 (55%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +2
Query: 290 RFLDNFDPKNSARERRKANRKKY-FTSRKVKRIYDDHGHIAETGKDLCDCLDEKCPGCHF 466
+FL NF+P S RE+RK NRK K IY++ G ETGKD+CDCLD CPGCHF
Sbjct: 66 KFLANFNPNTSRREKRKLNRKSTPLVVPKTTGIYNERGIHRETGKDMCDCLDMSCPGCHF 125
Query: 467 PCANCNSNKCGHECRIT 517
PC C S+KCG CR+T
Sbjct: 126 PCQCCGSSKCGPHCRVT 142
>UniRef50_UPI0000DB72E5 Cluster: PREDICTED: similar to CG14464-PA.3;
n=2; Apocrita|Rep: PREDICTED: similar to CG14464-PA.3 -
Apis mellifera
Length = 144
Score = 98.7 bits (235), Expect = 7e-20
Identities = 41/74 (55%), Positives = 52/74 (70%)
Frame = +2
Query: 290 RFLDNFDPKNSARERRKANRKKYFTSRKVKRIYDDHGHIAETGKDLCDCLDEKCPGCHFP 469
+FL NFDP++S RE+RK +R+ Y K +YD++G +TG DLCDCL+ C GCHF
Sbjct: 45 KFLRNFDPEHSEREKRKLHRRLY-QGHKRHVMYDENGVYTQTGDDLCDCLNLNCAGCHFS 103
Query: 470 CANCNSNKCGHECR 511
C CNS KCGHECR
Sbjct: 104 CPKCNSPKCGHECR 117
>UniRef50_A0NBN7 Cluster: ENSANGP00000030250; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000030250 - Anopheles gambiae
str. PEST
Length = 137
Score = 88.2 bits (209), Expect = 1e-16
Identities = 37/74 (50%), Positives = 47/74 (63%)
Frame = +2
Query: 290 RFLDNFDPKNSARERRKANRKKYFTSRKVKRIYDDHGHIAETGKDLCDCLDEKCPGCHFP 469
+FL +FDP S RE+RK R S+K+ +YDD G + G D+CDCL+ CPGCH P
Sbjct: 40 KFLADFDPVTSQREKRKLARNIRAASKKLG-LYDDKGVLRSNGVDMCDCLELSCPGCHMP 98
Query: 470 CANCNSNKCGHECR 511
C +C S KCG CR
Sbjct: 99 CPDCGSGKCGKVCR 112
>UniRef50_UPI0000586FB3 Cluster: PREDICTED: hypothetical protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 128
Score = 87.0 bits (206), Expect = 2e-16
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 3/73 (4%)
Frame = +2
Query: 302 NFDPKNSARERRKANR---KKYFTSRKVKRIYDDHGHIAETGKDLCDCLDEKCPGCHFPC 472
NF P+ S RE+RK R +++ + + +YD +GH++ TG+DLCDCL + CPGCH+PC
Sbjct: 35 NFKPEESEREKRKLRRLQEEEHQRHLQNRTMYDANGHLSSTGQDLCDCLGKDCPGCHYPC 94
Query: 473 ANCNSNKCGHECR 511
+C S KCG CR
Sbjct: 95 KDCGSIKCGPVCR 107
>UniRef50_A7RZF3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 167
Score = 77.0 bits (181), Expect = 2e-13
Identities = 38/79 (48%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Frame = +2
Query: 296 LDNFDPKNSARERRKANR-------KKYFTSRKVKRIYDDHGHIAETGKDLCDCLDEKCP 454
L F+P S RE+RK N+ KK TSR+ R + GKD+CDC D CP
Sbjct: 70 LSGFNPDRSRREQRKVNQFVEKTLQKKEHTSRRADR--NGAAVRLSDGKDVCDCQDLNCP 127
Query: 455 GCHFPCANCNSNKCGHECR 511
GCHFPC+ C S KCG ECR
Sbjct: 128 GCHFPCSACGSEKCGVECR 146
>UniRef50_Q3UKZ7 Cluster: Blastocyst blastocyst cDNA, RIKEN
full-length enriched library, clone:I1C0044L11
product:weakly similar to DJ299F11.1 (Similar to
D.melanogaster protein (CG14464)); n=19; Amniota|Rep:
Blastocyst blastocyst cDNA, RIKEN full-length enriched
library, clone:I1C0044L11 product:weakly similar to
DJ299F11.1 (Similar to D.melanogaster protein (CG14464))
- Mus musculus (Mouse)
Length = 152
Score = 73.7 bits (173), Expect = 2e-12
Identities = 30/71 (42%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +2
Query: 302 NFDPKNSARERRKANRKKYFTSR-KVKRIYDDHGHIAETGKDLCDCLDEKCPGCHFPCAN 478
N + + ++ R + +YF+ + KV + YD G + DLCDCL++ C GC +PC
Sbjct: 55 NPETRQQKKKARMSKMNEYFSVKYKVMKKYDKSGRLICNDVDLCDCLEKNCLGCFYPCPK 114
Query: 479 CNSNKCGHECR 511
CNSNKCG ECR
Sbjct: 115 CNSNKCGPECR 125
>UniRef50_UPI0000F2E9C9 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 171
Score = 71.3 bits (167), Expect = 1e-11
Identities = 31/65 (47%), Positives = 39/65 (60%)
Frame = +2
Query: 317 NSARERRKANRKKYFTSRKVKRIYDDHGHIAETGKDLCDCLDEKCPGCHFPCANCNSNKC 496
NS ER R++ SR+ +R YD G + G D+CDCL +C GC +PC CNS KC
Sbjct: 81 NSKTERGIQTRRRR-RSRRERRKYDHKGRLLCNGLDMCDCLQLECSGCFYPCPKCNSKKC 139
Query: 497 GHECR 511
G ECR
Sbjct: 140 GVECR 144
>UniRef50_Q0P4A1 Cluster: Zgc:153243; n=3; Clupeocephala|Rep:
Zgc:153243 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 224
Score = 68.9 bits (161), Expect = 7e-11
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +2
Query: 380 RIYDDHGHIAETGKDLCDCLDEKCPGCHFPCANCNSNKCGHECR 511
++YD G + GKDLCDCLD C GC +PC C S KCG ECR
Sbjct: 157 KVYDSKGMLISCGKDLCDCLDVDCMGCFYPCPECGSRKCGVECR 200
>UniRef50_Q8N8R7 Cluster: Uncharacterized protein C11orf46; n=19;
Euteleostomi|Rep: Uncharacterized protein C11orf46 -
Homo sapiens (Human)
Length = 260
Score = 68.9 bits (161), Expect = 7e-11
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Frame = +2
Query: 305 FDPKNSARERRKANRKKYFTS-RKV----KRIYDDHGHIAETGKDLCDCLDEKCPGCHFP 469
F P+ RE+R+ + S R+V ++YD G + +G DLCDCLDE C GC +
Sbjct: 163 FAPETGKREKRRLTKNATAGSDRQVIPAKSKVYDSQGLLIFSGMDLCDCLDEDCLGCFYA 222
Query: 470 CANCNSNKCGHECR 511
C C S KCG ECR
Sbjct: 223 CPACGSTKCGAECR 236
>UniRef50_Q86E94 Cluster: Clone ZZD690 mRNA sequence; n=1;
Schistosoma japonicum|Rep: Clone ZZD690 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 165
Score = 68.5 bits (160), Expect = 9e-11
Identities = 29/59 (49%), Positives = 36/59 (61%)
Frame = +2
Query: 338 KANRKKYFTSRKVKRIYDDHGHIAETGKDLCDCLDEKCPGCHFPCANCNSNKCGHECRI 514
K NRK +S ++ +YD G + ET + CDCL KCPGCH PC C+S CG CRI
Sbjct: 97 KCNRK---SSDRLHPLYDSRGRLLETLEYKCDCLKPKCPGCHLPCRRCHSTFCGASCRI 152
>UniRef50_UPI0000F2E9C8 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 227
Score = 66.5 bits (155), Expect = 3e-10
Identities = 25/48 (52%), Positives = 32/48 (66%)
Frame = +2
Query: 368 RKVKRIYDDHGHIAETGKDLCDCLDEKCPGCHFPCANCNSNKCGHECR 511
+K +R YD G + G DLCDCL +CPGC +PC C+S KCG +CR
Sbjct: 153 KKDRRKYDRQGRLLCNGVDLCDCLMAECPGCFYPCPKCSSRKCGVKCR 200
>UniRef50_Q8MRI3 Cluster: LD29015p; n=1; Drosophila
melanogaster|Rep: LD29015p - Drosophila melanogaster
(Fruit fly)
Length = 127
Score = 64.1 bits (149), Expect = 2e-09
Identities = 25/61 (40%), Positives = 38/61 (62%)
Frame = +2
Query: 329 ERRKANRKKYFTSRKVKRIYDDHGHIAETGKDLCDCLDEKCPGCHFPCANCNSNKCGHEC 508
E +K RKK S YD++G+I G D+CDC++++C GC + C +C S +CG +C
Sbjct: 46 ENKKKGRKKCQNSA-----YDEYGNIRSNGLDICDCMNQECDGCWYNCRSCGSTRCGPQC 100
Query: 509 R 511
R
Sbjct: 101 R 101
>UniRef50_Q61LB7 Cluster: Putative uncharacterized protein CBG08995;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG08995 - Caenorhabditis
briggsae
Length = 203
Score = 55.2 bits (127), Expect = 9e-07
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Frame = +2
Query: 299 DNFDPKNSARERRK-ANRKKYFTSRKVKRI---YDDHGHIAETGK------DLCDCLDEK 448
D D N+ R RR N K ++VK +D +G ++ T + DLCDCLD K
Sbjct: 87 DTSDIYNTNRARRNHVNLSKQQQMQEVKEKALHHDANGKLSSTVRGETSVIDLCDCLDAK 146
Query: 449 CPGCHFPCANCNSNKCGHECR 511
C GC +PC C+S KC CR
Sbjct: 147 CDGCQWPCKTCSSRKCLIGCR 167
>UniRef50_Q3Y413 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 204
Score = 52.8 bits (121), Expect = 5e-06
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Frame = +2
Query: 290 RFL-DNFDPKNSARERRKANRKKYFTSRKVKRIYDDHGHIAETGK------DLCDCLDEK 448
RFL D+ D ++ R +R A K+ R +D G ++ T K DLCDCL +
Sbjct: 89 RFLPDSVDIISTNRSKRVAAEKQA-DLRDEPLHHDKTGKLSVTAKGQTLFFDLCDCLVVE 147
Query: 449 CPGCHFPCANCNSNKCGHECR 511
C GCH+PC C S KC CR
Sbjct: 148 CDGCHWPCKQCKSRKCLIGCR 168
>UniRef50_UPI0000D55B19 Cluster: PREDICTED: similar to CG15011-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG15011-PA - Tribolium castaneum
Length = 839
Score = 37.9 bits (84), Expect = 0.14
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Frame = +2
Query: 350 KKYFTSRKVKRIYDDHGHIAETGKDLCDCLDEKCPGCHFPCA---NCNSNKCGHEC 508
K YF K KR+ D + H C D CP C PC NC ++KC C
Sbjct: 397 KPYFCETKCKRMRDCNKHPCNK-----KCCDGSCPPCEKPCGRTLNCGNHKCNSVC 447
>UniRef50_A2EC80 Cluster: Zinc finger in N-recognin family protein;
n=2; Trichomonas vaginalis G3|Rep: Zinc finger in
N-recognin family protein - Trichomonas vaginalis G3
Length = 449
Score = 36.3 bits (80), Expect = 0.43
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 395 HGHIAETGKDLCDCLDEKCPGCHFPCANCNSNKCGHEC 508
HGH + C C DEKC CH +C+ ++CG C
Sbjct: 41 HGHECHEHEHECHCHDEKCE-CHEHECHCHDHECGCGC 77
>UniRef50_Q9PPW3 Cluster: Conserved hypothetical; n=1; Ureaplasma
parvum|Rep: Conserved hypothetical - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 971
Score = 34.7 bits (76), Expect = 1.3
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = -1
Query: 287 SFKKYMLQTQNNIKKIFSSARYYPNTND 204
+F KY++ +NN+KKIFS+ + + +TND
Sbjct: 15 TFIKYLICNENNVKKIFSNEKLHLDTND 42
>UniRef50_A5K2I1 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1008
Score = 33.5 bits (73), Expect = 3.0
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +2
Query: 299 DNFDPKNSARERRKANRKKYFTSRKVKRIYDDHGHIAETGKDLCDCLDEKC-PGCHFPCA 475
++ D + RK +KKY S R D G +G+ D ++E+C C C
Sbjct: 526 NSLDSSGKVKRERKKKKKKYVLSDSSSRSPDGKGRSDASGE---DAVEEECEEECEEECE 582
Query: 476 NCNSNKCGHEC 508
++C EC
Sbjct: 583 EEYDDECEEEC 593
>UniRef50_Q59NX5 Cluster: Potential fungal zinc cluster
transcription factor; n=1; Candida albicans|Rep:
Potential fungal zinc cluster transcription factor -
Candida albicans (Yeast)
Length = 787
Score = 33.5 bits (73), Expect = 3.0
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +2
Query: 353 KYFTSRKVKRIYDDHGHIAETGKDLCDCLDEKCPGCHFPCANCNSNKCGHECRIT 517
K + R+++RI DD + D C KC G PC C +K GH+C T
Sbjct: 9 KKASKRRIRRIPDDQRQKVSSACDNCKKRKFKCSG-EKPCFEC--SKKGHDCTYT 60
>UniRef50_Q7T7N5 Cluster: Polyprotein; n=24; Potyvirus|Rep:
Polyprotein - Papaya leaf distortion mosaic virus
Length = 3269
Score = 32.3 bits (70), Expect = 6.9
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 308 DPKNSARERRKANRKKYFTSRK--VKRIYDDHGHIAETGKDLCDCLD 442
D KN+AR R++AN+K F +R+ V RI ++ E KD+ + D
Sbjct: 273 DIKNAARRRKRANKKIPFVARENDVARIETHEPNVKEETKDVEEATD 319
>UniRef50_A3ESF7 Cluster: Organic solvent tolerance protein OstA;
n=1; Leptospirillum sp. Group II UBA|Rep: Organic
solvent tolerance protein OstA - Leptospirillum sp.
Group II UBA
Length = 769
Score = 32.3 bits (70), Expect = 6.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 356 YFTSRKVKRIYDDHGHIAETGKDLCDCLDEKCP 454
Y + ++R+ DH H+ + G CDCL P
Sbjct: 150 YIHGKTIERVTPDHFHVIDGGVTTCDCLPNTSP 182
>UniRef50_Q6IIK0 Cluster: HDC17821; n=1; Drosophila
melanogaster|Rep: HDC17821 - Drosophila melanogaster
(Fruit fly)
Length = 360
Score = 32.3 bits (70), Expect = 6.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -3
Query: 507 HSWPHLLELQFAHGKWHPGHF 445
HSWP E AH +WHPG F
Sbjct: 82 HSWPRTSEAPLAH-RWHPGFF 101
>UniRef50_A1DFT8 Cluster: NF-X1 finger and helicase protein, putative;
n=6; cellular organisms|Rep: NF-X1 finger and helicase
protein, putative - Neosartorya fischeri (strain ATCC
1020 / DSM 3700 / NRRL 181)(Aspergillus fischerianus
(strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 1940
Score = 32.3 bits (70), Expect = 6.9
Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +2
Query: 440 DEKCPGCHFPC-ANCNSNKCGHECR 511
DE CP C PC C +KC +CR
Sbjct: 1414 DEPCPPCEEPCDVQCGHSKCTKKCR 1438
>UniRef50_UPI000150A2C7 Cluster: hypothetical protein
TTHERM_00136420; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00136420 - Tetrahymena
thermophila SB210
Length = 543
Score = 31.9 bits (69), Expect = 9.2
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 9/37 (24%)
Frame = +2
Query: 419 KDLCDCLDEK---------CPGCHFPCANCNSNKCGH 502
KD+ D ++EK CP C P NC ++KCGH
Sbjct: 376 KDVADQIEEKFQNLLKEFDCPICFLPFENCYTSKCGH 412
>UniRef50_A7S7B8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 450
Score = 31.9 bits (69), Expect = 9.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 398 GHIAETGKDLCDCLDEKCPGCHFPCANCNSNKCGHEC 508
GH A+ GK C+C E CP P ++N +EC
Sbjct: 300 GHCAKDGKATCEC-SEDCPKTLKPVCGSDNNDYDNEC 335
>UniRef50_A0CAJ0 Cluster: Chromosome undetermined scaffold_161, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_161, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 2818
Score = 31.9 bits (69), Expect = 9.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 431 DCLDEKCPGCHFPCANCNSNKC 496
D ++E C CH+ C C++N+C
Sbjct: 1458 DFVNESCLQCHYTCDTCDANRC 1479
>UniRef50_Q6C014 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 255
Score = 31.9 bits (69), Expect = 9.2
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 4/30 (13%)
Frame = +2
Query: 431 DCLDEKCPGC----HFPCANCNSNKCGHEC 508
+C D C GC H C NC S CG C
Sbjct: 226 NCGDTSCGGCSGKNHNKCPNCGSRNCGGNC 255
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 449,411,817
Number of Sequences: 1657284
Number of extensions: 7825516
Number of successful extensions: 22604
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 21113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22575
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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