Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS306A04f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC047775-1|AAH47775.1| 260|Homo sapiens chromosome 11 open read... 69 1e-11
AK096287-1|BAC04747.1| 260|Homo sapiens protein ( Homo sapiens ... 69 1e-11
X03072-1|CAA26874.1| 370|Homo sapiens int-1 protein protein. 31 2.4
BT019429-1|AAV38236.1| 370|Homo sapiens wingless-type MMTV inte... 31 2.4
BC074799-1|AAH74799.1| 370|Homo sapiens wingless-type MMTV inte... 31 2.4
BC074798-1|AAH74798.1| 370|Homo sapiens wingless-type MMTV inte... 31 2.4
BC071596-1|AAH71596.1| 1287|Homo sapiens RAB6 interacting protei... 30 4.3
BC051193-1|AAH51193.1| 733|Homo sapiens NFXL1 protein protein. 30 4.3
BC009354-1|AAH09354.2| 948|Homo sapiens RAB6IP1 protein protein. 30 4.3
AK131285-1|BAD18459.1| 736|Homo sapiens protein ( Homo sapiens ... 30 4.3
AK025499-1|BAB15155.1| 872|Homo sapiens protein ( Homo sapiens ... 30 4.3
AC107068-2|AAY40918.1| 733|Homo sapiens unknown protein. 30 4.3
AB029014-1|BAA83043.1| 1359|Homo sapiens KIAA1091 protein protein. 30 4.3
AF439430-1|AAL74416.1| 760|Homo sapiens thyroid peroxidase prot... 29 7.5
>BC047775-1|AAH47775.1| 260|Homo sapiens chromosome 11 open reading
frame 46 protein.
Length = 260
Score = 68.9 bits (161), Expect = 1e-11
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Frame = +2
Query: 305 FDPKNSARERRKANRKKYFTS-RKV----KRIYDDHGHIAETGKDLCDCLDEKCPGCHFP 469
F P+ RE+R+ + S R+V ++YD G + +G DLCDCLDE C GC +
Sbjct: 163 FAPETGKREKRRLTKNATAGSDRQVIPAKSKVYDSQGLLIFSGMDLCDCLDEDCLGCFYA 222
Query: 470 CANCNSNKCGHECR 511
C C S KCG ECR
Sbjct: 223 CPACGSTKCGAECR 236
>AK096287-1|BAC04747.1| 260|Homo sapiens protein ( Homo sapiens
cDNA FLJ38968 fis, clone NT2RI2002316. ).
Length = 260
Score = 68.9 bits (161), Expect = 1e-11
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Frame = +2
Query: 305 FDPKNSARERRKANRKKYFTS-RKV----KRIYDDHGHIAETGKDLCDCLDEKCPGCHFP 469
F P+ RE+R+ + S R+V ++YD G + +G DLCDCLDE C GC +
Sbjct: 163 FAPETGKREKRRLTKNATAGSDRQVIPAKSKVYDSQGLLIFSGMDLCDCLDEDCLGCFYA 222
Query: 470 CANCNSNKCGHECR 511
C C S KCG ECR
Sbjct: 223 CPACGSTKCGAECR 236
>X03072-1|CAA26874.1| 370|Homo sapiens int-1 protein protein.
Length = 370
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +2
Query: 398 GHIAETGK--DLCDCLDEKCPGCHFPCANCNSNKCGHEC 508
GH T + + C+C C CH C NC + HEC
Sbjct: 333 GHRTRTQRVTERCNCTFHWC--CHVSCRNCTHTRVLHEC 369
>BT019429-1|AAV38236.1| 370|Homo sapiens wingless-type MMTV
integration site family, member 1 protein.
Length = 370
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +2
Query: 398 GHIAETGK--DLCDCLDEKCPGCHFPCANCNSNKCGHEC 508
GH T + + C+C C CH C NC + HEC
Sbjct: 333 GHRTRTQRVTERCNCTFHWC--CHVSCRNCTHTRVLHEC 369
>BC074799-1|AAH74799.1| 370|Homo sapiens wingless-type MMTV
integration site family, member 1 protein.
Length = 370
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +2
Query: 398 GHIAETGK--DLCDCLDEKCPGCHFPCANCNSNKCGHEC 508
GH T + + C+C C CH C NC + HEC
Sbjct: 333 GHRTRTQRVTERCNCTFHWC--CHVSCRNCTHTRVLHEC 369
>BC074798-1|AAH74798.1| 370|Homo sapiens wingless-type MMTV
integration site family, member 1 protein.
Length = 370
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +2
Query: 398 GHIAETGK--DLCDCLDEKCPGCHFPCANCNSNKCGHEC 508
GH T + + C+C C CH C NC + HEC
Sbjct: 333 GHRTRTQRVTERCNCTFHWC--CHVSCRNCTHTRVLHEC 369
>BC071596-1|AAH71596.1| 1287|Homo sapiens RAB6 interacting protein 1
protein.
Length = 1287
Score = 30.3 bits (65), Expect = 4.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 498 PHLLELQFAHGKWHPGHFSSRQS 430
PHLL+++ GK+ PG F QS
Sbjct: 653 PHLLDMKIGQGKYEPGFFPKLQS 675
>BC051193-1|AAH51193.1| 733|Homo sapiens NFXL1 protein protein.
Length = 733
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 413 TGKDLCDCLDEKCPGCHFPCANCNSNKCGHEC 508
T ++ C CP CH PC KCGH C
Sbjct: 563 TSQEKHRCHFGSCPPCHQPCQKV-LEKCGHLC 593
>BC009354-1|AAH09354.2| 948|Homo sapiens RAB6IP1 protein protein.
Length = 948
Score = 30.3 bits (65), Expect = 4.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 498 PHLLELQFAHGKWHPGHFSSRQS 430
PHLL+++ GK+ PG F QS
Sbjct: 314 PHLLDMKIGQGKYEPGFFPKLQS 336
>AK131285-1|BAD18459.1| 736|Homo sapiens protein ( Homo sapiens
cDNA FLJ16238 fis, clone HCASM2003018, weakly similar
to Homo sapiens nuclear transcription factor NFX2 (NFX2)
mRNA. ).
Length = 736
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 413 TGKDLCDCLDEKCPGCHFPCANCNSNKCGHEC 508
T ++ C CP CH PC KCGH C
Sbjct: 406 TSQEKHRCHFGSCPPCHQPCQKV-LEKCGHLC 436
>AK025499-1|BAB15155.1| 872|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21846 fis, clone HEP01887. ).
Length = 872
Score = 30.3 bits (65), Expect = 4.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 498 PHLLELQFAHGKWHPGHFSSRQS 430
PHLL+++ GK+ PG F QS
Sbjct: 238 PHLLDMKIGQGKYEPGFFPKLQS 260
>AC107068-2|AAY40918.1| 733|Homo sapiens unknown protein.
Length = 733
Score = 30.3 bits (65), Expect = 4.3
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 413 TGKDLCDCLDEKCPGCHFPCANCNSNKCGHEC 508
T ++ C CP CH PC KCGH C
Sbjct: 563 TSQEKHRCHFGSCPPCHQPCQKV-LEKCGHLC 593
>AB029014-1|BAA83043.1| 1359|Homo sapiens KIAA1091 protein protein.
Length = 1359
Score = 30.3 bits (65), Expect = 4.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 498 PHLLELQFAHGKWHPGHFSSRQS 430
PHLL+++ GK+ PG F QS
Sbjct: 725 PHLLDMKIGQGKYEPGFFPKLQS 747
>AF439430-1|AAL74416.1| 760|Homo sapiens thyroid peroxidase
protein.
Length = 760
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 419 KDLCDCLDEKCPGCHFPCANCNSNKCGHEC 508
KD+ +C D P CH A C S K G +C
Sbjct: 622 KDVNECADGAHPPCH-ASARCRSTKGGFQC 650
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,145,557
Number of Sequences: 237096
Number of extensions: 1118680
Number of successful extensions: 2656
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2653
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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