Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306A03f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   4.7  
U89804-1|AAD03795.1|   89|Anopheles gambiae Tc1-like transposase...    23   6.2  
AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase...    23   8.2  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 253 RNQPWSSHHQM*IGWVKTSSPFFYS 327
           R Q W++HH M +   +T+SP  +S
Sbjct: 387 RGQIWNTHHGMGMFGNQTTSPDAFS 411


>U89804-1|AAD03795.1|   89|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 89

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 437 CFSLCGVGICFWV 399
           CFS  GVG  FW+
Sbjct: 8   CFSRYGVGPIFWI 20


>AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase
           alternate isoform protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 11/50 (22%), Positives = 22/50 (44%)
 Frame = +1

Query: 244 ISWRNQPWSSHHQM*IGWVKTSSPFFYSWLWQISCRPILAATCRIAAVQQ 393
           ++W      + H        T+ P+F S  W +   PI  ++ ++ A +Q
Sbjct: 166 LAWMGMQELNRHYYTYKGSLTTPPYFESVTWLVYKTPIYVSSKQLEAFRQ 215


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 322,764
Number of Sequences: 2352
Number of extensions: 4955
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)