Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306A01f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   2.9  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   2.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   5.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   5.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   5.0  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.6  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   6.6  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -2

Query: 112 PALLYHLSLCAYHSLNGQAFLIFITTKQLILQFSI 8
           P +LY    C Y +    +F+I+ TT  +IL  ++
Sbjct: 331 PMILY----CVYTTATYDSFMIYKTTNIIILGLNV 361


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -2

Query: 112 PALLYHLSLCAYHSLNGQAFLIFITTKQLILQFSI 8
           P +LY    C Y +    +F+I+ TT  +IL  ++
Sbjct: 56  PMILY----CVYTTATYDSFMIYKTTNIIILGLNV 86


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 180 HKNHQGSRRRNSDSN 224
           HKN+ G  + N D N
Sbjct: 456 HKNNLGDSKNNQDGN 470


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 180 HKNHQGSRRRNSDSN 224
           HKN+ G  + N D N
Sbjct: 348 HKNNLGDSKNNQDGN 362


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = -2

Query: 124 LFLFPALLYHLSLCAYHSLNGQAFLIFITTKQLILQFSI 8
           L LF  LLY  SL      +GQ +      K LI   S+
Sbjct: 50  LILFAVLLYFASLEKNPLFDGQLYSFNTFAKLLIFVVSL 88


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 353 VHRATCRGCSFCSVCLSAARSH 288
           V+R +CR CS+ +    + + H
Sbjct: 284 VYRYSCRDCSYATKYCHSLKIH 305


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 353 VHRATCRGCSFCSVCLSAARSH 288
           V+R +CR CS+ +    + + H
Sbjct: 42  VYRYSCRDCSYATKYCHSLKIH 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,965
Number of Sequences: 336
Number of extensions: 1932
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)