Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306A01f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061606-1|AAL29154.1|  433|Drosophila melanogaster SD07148p pro...   219   1e-57
AF145307-1|AAF08388.1|  433|Drosophila melanogaster 26S proteaso...   219   1e-57
AE013599-469|AAF59219.1|  433|Drosophila melanogaster CG1341-PA ...   219   1e-57
AY051732-1|AAK93156.1|  405|Drosophila melanogaster LD26005p pro...    32   0.41 
AF043734-1|AAC63219.1|  405|Drosophila melanogaster Pros45 prote...    32   0.41 
AE014298-3108|AAF50835.1|  405|Drosophila melanogaster CG1489-PA...    32   0.41 

>AY061606-1|AAL29154.1|  433|Drosophila melanogaster SD07148p
           protein.
          Length = 433

 Score =  219 bits (536), Expect = 1e-57
 Identities = 111/155 (71%), Positives = 118/155 (76%)
 Frame = +1

Query: 55  MPDHLGNDMRXXXXXXXXXXXXXXSLDEGDIALLKSYGQGQYTKIIKEVEEGIQTVMKRV 234
           MPD+LG+D R              SLDEGDI LLK+YGQ QY K IK +EE IQ  +K+V
Sbjct: 1   MPDYLGDDQRKVKHDEKEDKEIK-SLDEGDIELLKTYGQSQYHKSIKSIEEDIQKAVKQV 59

Query: 235 NELTGIKESDTGXXXXXXXXXXXXKQTLQNEQPLQVARCTKIINADSNDPKYIINVKQFA 414
           NELTGIKESDTG            KQ LQNEQPLQVARCTKIINADS+DPKYIINVKQFA
Sbjct: 60  NELTGIKESDTGLAPPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFA 119

Query: 415 KFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLP 519
           KFVVDL DSVAPTDIEEGMRVGVDRNKYQIHIPLP
Sbjct: 120 KFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLP 154


>AF145307-1|AAF08388.1|  433|Drosophila melanogaster 26S proteasome
           regulatory complexsubunit p48B protein.
          Length = 433

 Score =  219 bits (536), Expect = 1e-57
 Identities = 111/155 (71%), Positives = 118/155 (76%)
 Frame = +1

Query: 55  MPDHLGNDMRXXXXXXXXXXXXXXSLDEGDIALLKSYGQGQYTKIIKEVEEGIQTVMKRV 234
           MPD+LG+D R              SLDEGDI LLK+YGQ QY K IK +EE IQ  +K+V
Sbjct: 1   MPDYLGDDQRKVKHDEKEDKEIK-SLDEGDIELLKTYGQSQYHKSIKSIEEDIQKAVKQV 59

Query: 235 NELTGIKESDTGXXXXXXXXXXXXKQTLQNEQPLQVARCTKIINADSNDPKYIINVKQFA 414
           NELTGIKESDTG            KQ LQNEQPLQVARCTKIINADS+DPKYIINVKQFA
Sbjct: 60  NELTGIKESDTGLAPPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFA 119

Query: 415 KFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLP 519
           KFVVDL DSVAPTDIEEGMRVGVDRNKYQIHIPLP
Sbjct: 120 KFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLP 154


>AE013599-469|AAF59219.1|  433|Drosophila melanogaster CG1341-PA
           protein.
          Length = 433

 Score =  219 bits (536), Expect = 1e-57
 Identities = 111/155 (71%), Positives = 118/155 (76%)
 Frame = +1

Query: 55  MPDHLGNDMRXXXXXXXXXXXXXXSLDEGDIALLKSYGQGQYTKIIKEVEEGIQTVMKRV 234
           MPD+LG+D R              SLDEGDI LLK+YGQ QY K IK +EE IQ  +K+V
Sbjct: 1   MPDYLGDDQRKVKHDEKEDKEIK-SLDEGDIELLKTYGQSQYHKSIKSIEEDIQKAVKQV 59

Query: 235 NELTGIKESDTGXXXXXXXXXXXXKQTLQNEQPLQVARCTKIINADSNDPKYIINVKQFA 414
           NELTGIKESDTG            KQ LQNEQPLQVARCTKIINADS+DPKYIINVKQFA
Sbjct: 60  NELTGIKESDTGLAPPALWDLAADKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFA 119

Query: 415 KFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLP 519
           KFVVDL DSVAPTDIEEGMRVGVDRNKYQIHIPLP
Sbjct: 120 KFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLP 154


>AY051732-1|AAK93156.1|  405|Drosophila melanogaster LD26005p
           protein.
          Length = 405

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +1

Query: 385 KYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLP 519
           K ++ V    KFVVDL  ++   D+    RV +    Y +H  LP
Sbjct: 83  KVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILP 127


>AF043734-1|AAC63219.1|  405|Drosophila melanogaster Pros45
           proteosome subunit homolog protein.
          Length = 405

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +1

Query: 385 KYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLP 519
           K ++ V    KFVVDL  ++   D+    RV +    Y +H  LP
Sbjct: 83  KVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILP 127


>AE014298-3108|AAF50835.1|  405|Drosophila melanogaster CG1489-PA
           protein.
          Length = 405

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +1

Query: 385 KYIINVKQFAKFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLP 519
           K ++ V    KFVVDL  ++   D+    RV +    Y +H  LP
Sbjct: 83  KVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILP 127


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,672,817
Number of Sequences: 53049
Number of extensions: 333319
Number of successful extensions: 918
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)