Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS306A01f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78012-4|CAB01414.1|  435|Caenorhabditis elegans Hypothetical pr...   202   1e-52
Z93386-1|CAB07645.1|  442|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U97008-6|AAB52307.1|  323|Caenorhabditis elegans Serpentine rece...    29   2.7  
AF022985-8|AAB69966.1|  354|Caenorhabditis elegans Hypothetical ...    28   4.7  
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p...    27   6.2  
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p...    27   6.2  
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p...    27   6.2  
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr...    27   6.2  
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres...    27   6.2  
AF067215-1|AAC17011.1|  495|Caenorhabditis elegans Hypothetical ...    27   8.1  

>Z78012-4|CAB01414.1|  435|Caenorhabditis elegans Hypothetical
           protein C52E4.4 protein.
          Length = 435

 Score =  202 bits (493), Expect = 1e-52
 Identities = 97/156 (62%), Positives = 115/156 (73%), Gaps = 1/156 (0%)
 Frame = +1

Query: 55  MPDHLGNDMRXXXXXXXXXXXXXX-SLDEGDIALLKSYGQGQYTKIIKEVEEGIQTVMKR 231
           MPDHLG+DMR               +LDEGDIA+LK YGQG Y + +K ++  I+  +K+
Sbjct: 1   MPDHLGDDMRKTKKDDTKEEEKNFQALDEGDIAVLKRYGQGPYAEQLKTLDADIENCLKK 60

Query: 232 VNELTGIKESDTGXXXXXXXXXXXXKQTLQNEQPLQVARCTKIINADSNDPKYIINVKQF 411
           VNEL+G+KESDTG            KQ +Q EQPLQVARCTKII +D +DP+Y+INVKQF
Sbjct: 61  VNELSGVKESDTGLAPPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQF 120

Query: 412 AKFVVDLQDSVAPTDIEEGMRVGVDRNKYQIHIPLP 519
           AKFVVDL DSVAPTDIEEGMRVGVDRNKYQIH+PLP
Sbjct: 121 AKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHLPLP 156


>Z93386-1|CAB07645.1|  442|Caenorhabditis elegans Hypothetical
           protein R11H6.2 protein.
          Length = 442

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = -1

Query: 383 GSFESALMIFVHRATCRGCSFCSVCLSAARSHKAGGANPVSDSLMPVSSLTLFITV*IP 207
           G+  +A       A C G S CS+C SA    K      +  +LM +S+  + + + +P
Sbjct: 2   GALLAAPFCAASAACCFGSSACSLCCSACPGAKNSTTTRIMYALMLISATFMAVVMLLP 60


>U97008-6|AAB52307.1|  323|Caenorhabditis elegans Serpentine
           receptor, class h protein275 protein.
          Length = 323

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = -1

Query: 434 CKSTTNFANCFTLIIYFGSFESALMIFVHRATCRGC--SFCS 315
           C+S  N   CF +I   G F + +M+++H      C   FCS
Sbjct: 268 CQSANNL--CFIIIAAHGLFSTFIMLYIHSPYREACFRIFCS 307


>AF022985-8|AAB69966.1|  354|Caenorhabditis elegans Hypothetical
           protein T15B7.13 protein.
          Length = 354

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 234 NPLHYCLNSFFYFLDDFCVLSLAV*LQKRNI 142
           NPLH     FF  LD FC +S  V L ++ +
Sbjct: 68  NPLHIYFLVFFTVLDFFCNISFIVVLSQKEL 98


>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
           protein F11A10.1c protein.
          Length = 1242

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 180 HKNHQGSRRRNSDSNEE 230
           H+N  GSRRR SDS+ +
Sbjct: 301 HRNRNGSRRRRSDSDSD 317


>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
           protein F11A10.1b protein.
          Length = 1289

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 180 HKNHQGSRRRNSDSNEE 230
           H+N  GSRRR SDS+ +
Sbjct: 299 HRNRNGSRRRRSDSDSD 315


>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
           protein F11A10.1a protein.
          Length = 1291

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 180 HKNHQGSRRRNSDSNEE 230
           H+N  GSRRR SDS+ +
Sbjct: 301 HRNRNGSRRRRSDSDSD 317


>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
           protein F11A10.1c protein.
          Length = 1242

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 180 HKNHQGSRRRNSDSNEE 230
           H+N  GSRRR SDS+ +
Sbjct: 301 HRNRNGSRRRRSDSDSD 317


>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
           protein F11A10.1b protein.
          Length = 1289

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 180 HKNHQGSRRRNSDSNEE 230
           H+N  GSRRR SDS+ +
Sbjct: 299 HRNRNGSRRRRSDSDSD 315


>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
           protein F11A10.1a protein.
          Length = 1291

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 180 HKNHQGSRRRNSDSNEE 230
           H+N  GSRRR SDS+ +
Sbjct: 301 HRNRNGSRRRRSDSDSD 317


>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
           expression abnormal protein protein.
          Length = 1291

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 180 HKNHQGSRRRNSDSNEE 230
           H+N  GSRRR SDS+ +
Sbjct: 301 HRNRNGSRRRRSDSDSD 317


>AF067215-1|AAC17011.1|  495|Caenorhabditis elegans Hypothetical
           protein ZK380.2 protein.
          Length = 495

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = +1

Query: 184 KIIKEVEEGIQTVMKRVNELTGIK 255
           +IIK V+E ++ +MK+  E+ G+K
Sbjct: 113 QIIKNVDEAVKGLMKKDEEIAGLK 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,134,373
Number of Sequences: 27780
Number of extensions: 176658
Number of successful extensions: 529
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)