Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305H11f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC127762-1|AAI27763.1| 227|Homo sapiens ZC3H12D protein protein. 32 1.4
BC030701-1|AAH30701.3| 933|Homo sapiens LRRCC1 protein protein. 32 1.4
AL031133-3|CAM28211.1| 353|Homo sapiens zinc finger CCCH-type c... 32 1.4
AK127932-1|BAC87196.1| 321|Homo sapiens protein ( Homo sapiens ... 32 1.4
AK057990-1|BAB71626.1| 502|Homo sapiens protein ( Homo sapiens ... 32 1.4
AK056185-1|BAB71115.1| 720|Homo sapiens protein ( Homo sapiens ... 32 1.4
AB051551-1|BAB21855.1| 1029|Homo sapiens KIAA1764 protein protein. 32 1.4
AL136233-1|CAI17232.1| 196|Homo sapiens RUN and FYVE domain con... 30 4.3
AF461266-1|AAL67520.1| 606|Homo sapiens RUFY2 protein. 30 4.3
AF411980-1|AAL04164.1| 590|Homo sapiens Run- and FYVE-domain co... 30 4.3
AB040970-1|BAA96061.1| 619|Homo sapiens KIAA1537 protein protein. 30 4.3
Z83841-1|CAI42594.1| 686|Homo sapiens zinc finger CCCH-type con... 29 9.9
AL050306-1|CAI42834.1| 686|Homo sapiens zinc finger CCCH-type c... 29 9.9
>BC127762-1|AAI27763.1| 227|Homo sapiens ZC3H12D protein protein.
Length = 227
Score = 31.9 bits (69), Expect = 1.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 191 YLEHIRNVKRNLLAMNDNYRDLEDVNRQWQEVVEFR 298
Y+ + + ++ NDNYRDL+ N +W+ +E R
Sbjct: 182 YIVKVAYEQDGVIVSNDNYRDLQSENPEWKWFIEQR 217
>BC030701-1|AAH30701.3| 933|Homo sapiens LRRCC1 protein protein.
Length = 933
Score = 31.9 bits (69), Expect = 1.4
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 59 TINQNEYVLNMSNNSETSLSQRDKAAELPMELESIRALNACLQAYLEHIRNVKRNLLAMN 238
++++ L +N S++ + R K + + E+IR L CLQ EHI+ ++ + +
Sbjct: 793 SLSRENECLRKTNESDSD-ALRIKCKIIDDQTETIRKLKDCLQEKDEHIKRLQEKITEIE 851
Query: 239 D-NYRDLEDVNRQWQEVVE 292
L++ + Q EV+E
Sbjct: 852 KCTQEQLDEKSSQLDEVLE 870
>AL031133-3|CAM28211.1| 353|Homo sapiens zinc finger CCCH-type
containing 12D protein.
Length = 353
Score = 31.9 bits (69), Expect = 1.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 191 YLEHIRNVKRNLLAMNDNYRDLEDVNRQWQEVVEFR 298
Y+ + + ++ NDNYRDL+ N +W+ +E R
Sbjct: 182 YIVKVAYEQDGVIVSNDNYRDLQSENPEWKWFIEQR 217
>AK127932-1|BAC87196.1| 321|Homo sapiens protein ( Homo sapiens
cDNA FLJ46041 fis, clone SPLEN2036608. ).
Length = 321
Score = 31.9 bits (69), Expect = 1.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 191 YLEHIRNVKRNLLAMNDNYRDLEDVNRQWQEVVEFR 298
Y+ + + ++ NDNYRDL+ N +W+ +E R
Sbjct: 182 YIVKVAYEQDGVIVSNDNYRDLQSENPEWKWFIEQR 217
>AK057990-1|BAB71626.1| 502|Homo sapiens protein ( Homo sapiens
cDNA FLJ25261 fis, clone STM04691. ).
Length = 502
Score = 31.9 bits (69), Expect = 1.4
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 59 TINQNEYVLNMSNNSETSLSQRDKAAELPMELESIRALNACLQAYLEHIRNVKRNLLAMN 238
++++ L +N S++ + R K + + E+IR L CLQ EHI+ ++ + +
Sbjct: 263 SLSRENECLRKTNESDSD-ALRIKCKIIDDQTETIRKLKDCLQEKDEHIKRLQEKITEIE 321
Query: 239 D-NYRDLEDVNRQWQEVVE 292
L++ + Q EV+E
Sbjct: 322 KCTQEQLDEKSSQLDEVLE 340
>AK056185-1|BAB71115.1| 720|Homo sapiens protein ( Homo sapiens
cDNA FLJ31623 fis, clone NT2RI2003222, weakly similar to
INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1. ).
Length = 720
Score = 31.9 bits (69), Expect = 1.4
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 59 TINQNEYVLNMSNNSETSLSQRDKAAELPMELESIRALNACLQAYLEHIRNVKRNLLAMN 238
++++ L +N S++ + R K + + E+IR L CLQ EHI+ ++ + +
Sbjct: 637 SLSRENECLRKTNESDSD-ALRIKCKIIDDQTETIRKLKDCLQEKDEHIKRLQEKITEIE 695
Query: 239 D-NYRDLEDVNRQWQEVVE 292
L++ + Q EV+E
Sbjct: 696 KCTQEQLDEKSSQLDEVLE 714
>AB051551-1|BAB21855.1| 1029|Homo sapiens KIAA1764 protein protein.
Length = 1029
Score = 31.9 bits (69), Expect = 1.4
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 59 TINQNEYVLNMSNNSETSLSQRDKAAELPMELESIRALNACLQAYLEHIRNVKRNLLAMN 238
++++ L +N S++ + R K + + E+IR L CLQ EHI+ ++ + +
Sbjct: 790 SLSRENECLRKTNESDSD-ALRIKCKIIDDQTETIRKLKDCLQEKDEHIKRLQEKITEIE 848
Query: 239 D-NYRDLEDVNRQWQEVVE 292
L++ + Q EV+E
Sbjct: 849 KCTQEQLDEKSSQLDEVLE 867
>AL136233-1|CAI17232.1| 196|Homo sapiens RUN and FYVE domain
containing 2 protein.
Length = 196
Score = 30.3 bits (65), Expect = 4.3
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Frame = +2
Query: 83 LNMSNNSETSLSQRDKA-----AELPMELESIRALNACLQAY---LEHIRNVKRNLLAMN 238
L+ S++ + +SQ++K +L +E E + L LQ L H+RN + ++++
Sbjct: 15 LSKSDSLQKQISQKEKQLVQLETDLKIEKEWRQTLQEDLQKEKDALSHLRNETQQIISLK 74
Query: 239 DNYRDLEDVNRQWQEV 286
+ +L+D N+Q +++
Sbjct: 75 KEFLNLQDENQQLKKI 90
>AF461266-1|AAL67520.1| 606|Homo sapiens RUFY2 protein.
Length = 606
Score = 30.3 bits (65), Expect = 4.3
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Frame = +2
Query: 83 LNMSNNSETSLSQRDKA-----AELPMELESIRALNACLQAY---LEHIRNVKRNLLAMN 238
L+ S++ + +SQ++K +L +E E + L LQ L H+RN + ++++
Sbjct: 425 LSKSDSLQKQISQKEKQLVQLETDLKIEKEWRQTLQEDLQKEKDALSHLRNETQQIISLK 484
Query: 239 DNYRDLEDVNRQWQEV 286
+ +L+D N+Q +++
Sbjct: 485 KEFLNLQDENQQLKKI 500
>AF411980-1|AAL04164.1| 590|Homo sapiens Run- and FYVE-domain
containing protein Rabip4R protein.
Length = 590
Score = 30.3 bits (65), Expect = 4.3
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Frame = +2
Query: 83 LNMSNNSETSLSQRDKA-----AELPMELESIRALNACLQAY---LEHIRNVKRNLLAMN 238
L+ S++ + +SQ++K +L +E E + L LQ L H+RN + ++++
Sbjct: 409 LSKSDSLQKQISQKEKQLVQLETDLKIEKEWRQTLQEDLQKEKDALSHLRNETQQIISLK 468
Query: 239 DNYRDLEDVNRQWQEV 286
+ +L+D N+Q +++
Sbjct: 469 KEFLNLQDENQQLKKI 484
>AB040970-1|BAA96061.1| 619|Homo sapiens KIAA1537 protein protein.
Length = 619
Score = 30.3 bits (65), Expect = 4.3
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Frame = +2
Query: 83 LNMSNNSETSLSQRDKA-----AELPMELESIRALNACLQAY---LEHIRNVKRNLLAMN 238
L+ S++ + +SQ++K +L +E E + L LQ L H+RN + ++++
Sbjct: 438 LSKSDSLQKQISQKEKQLVQLETDLKIEKEWRQTLQEDLQKEKDALSHLRNETQQIISLK 497
Query: 239 DNYRDLEDVNRQWQEV 286
+ +L+D N+Q +++
Sbjct: 498 KEFLNLQDENQQLKKI 513
>Z83841-1|CAI42594.1| 686|Homo sapiens zinc finger CCCH-type
containing 12B protein.
Length = 686
Score = 29.1 bits (62), Expect = 9.9
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 224 LLAMNDNYRDLEDVNRQWQEVVEFR 298
++ NDNYRDL+ +W++ +E R
Sbjct: 144 IIVSNDNYRDLQVEKPEWKKFIEER 168
>AL050306-1|CAI42834.1| 686|Homo sapiens zinc finger CCCH-type
containing 12B protein.
Length = 686
Score = 29.1 bits (62), Expect = 9.9
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 224 LLAMNDNYRDLEDVNRQWQEVVEFR 298
++ NDNYRDL+ +W++ +E R
Sbjct: 144 IIVSNDNYRDLQVEKPEWKKFIEER 168
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,710,091
Number of Sequences: 237096
Number of extensions: 1366308
Number of successful extensions: 5903
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5903
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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