Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305H10f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O28261 Cluster: Putative uncharacterized protein; n=1; ...    35   0.98 
UniRef50_A7SYT1 Cluster: Predicted protein; n=1; Nematostella ve...    33   5.2  
UniRef50_Q9NA49 Cluster: Putative uncharacterized protein; n=1; ...    32   6.9  
UniRef50_Q54SA3 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  

>UniRef50_O28261 Cluster: Putative uncharacterized protein; n=1;
           Archaeoglobus fulgidus|Rep: Putative uncharacterized
           protein - Archaeoglobus fulgidus
          Length = 244

 Score = 35.1 bits (77), Expect = 0.98
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
 Frame = -1

Query: 365 RSKHGRPAFAEINELSKIL-MLSPILGQDVIVTLLHNGY-----RSFKLEITIA**QIHA 204
           R +  RP F  +  LS  + +++ + G  +++TL + GY     RSF +   +       
Sbjct: 117 RVRRTRPLFLSMGFLSGAMGVITGVNGPQIVITLANQGYAASFIRSFMITYLVVIDTATL 176

Query: 203 DRF*KFGHINSMYANNFALL 144
             F  FGH+N     NF +L
Sbjct: 177 SAFFAFGHVNVQILTNFLIL 196


>UniRef50_A7SYT1 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 195

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 460 HLCCARGIRFVDRICCCSGI 519
           ++CC  GI  V  ICCCSGI
Sbjct: 4   YICCCSGIYHVLYICCCSGI 23



 Score = 32.7 bits (71), Expect = 5.2
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +1

Query: 460 HLCCARGIRFVDRICCCSGI 519
           ++CC  GI  V  ICCCSGI
Sbjct: 148 YICCCSGIYHVLYICCCSGI 167


>UniRef50_Q9NA49 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 266

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 17/66 (25%), Positives = 30/66 (45%)
 Frame = -1

Query: 425 LRTNF*YSRYIPLFDTYH*SRSKHGRPAFAEINELSKILMLSPILGQDVIVTLLHNGYRS 246
           + TNF   R    F     ++    + AF + N + K+ M  P+ G D +  +  +   +
Sbjct: 68  ITTNFYIFRQGKEFHVVQKTKESGEKVAFKKTNNMCKVSMPKPLFGNDTVTEIYQSETVA 127

Query: 245 FKLEIT 228
           +K EIT
Sbjct: 128 YKYEIT 133


>UniRef50_Q54SA3 Cluster: Putative uncharacterized protein; n=1;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1194

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
 Frame = +3

Query: 72   FIRVSNFQDSINKF*KFPEFPLNLQKCKII-GIHTVYVPKFLKPICMYLLLSNRDF 236
            FI  SNF+DS+      P    NL++  +   I  V++PKF+K I   +LL N+DF
Sbjct: 1144 FIIASNFEDSLAIIKSTPH---NLKEEDLFDSISAVHIPKFIKKI---ILLINKDF 1193


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,943,444
Number of Sequences: 1657284
Number of extensions: 8276488
Number of successful extensions: 13371
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13369
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)