Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS305H10f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0335 + 2412766-2415655,2416108-2416208,2416871-2416895,241...    28   5.2  
06_01_1191 + 10240754-10240909,10241477-10241547,10241872-10242910     27   6.9  
02_05_0788 + 31758119-31758384,31758482-31758634,31759385-317595...    27   6.9  

>06_01_0335 +
           2412766-2415655,2416108-2416208,2416871-2416895,
           2416977-2417049,2417191-2417373,2418164-2418227,
           2418427-2418447,2418862-2418905,2420575-2420650,
           2421359-2421373
          Length = 1163

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +3

Query: 153 KIIGIHTVYVPKFLKPICMYLLLSNRDFQFKR 248
           +++ +   Y+P  LKP  +YL +   DF+ +R
Sbjct: 375 QVLALSYKYLPSHLKPCFLYLSIFPEDFEIQR 406


>06_01_1191 + 10240754-10240909,10241477-10241547,10241872-10242910
          Length = 421

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +3

Query: 153 KIIGIHTVYVPKFLKPICMYLLLSNRDFQFKR 248
           K++ +   Y+P  +KP  +YL +   DF  +R
Sbjct: 3   KVVALSYNYLPSHVKPCFLYLCIFPEDFDVQR 34


>02_05_0788 +
           31758119-31758384,31758482-31758634,31759385-31759509,
           31759650-31759678,31760943-31761008,31761059-31761125,
           31761226-31761370,31761404-31761451,31762014-31762182,
           31762645-31762779,31762858-31763064,31763608-31763735,
           31763815-31763866,31764046-31764060,31764502-31764609
          Length = 570

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 68  DIAKSKGNKSFKGRTHSPRAEF 3
           ++ K KGN +FKGR  S   EF
Sbjct: 465 ELLKEKGNSAFKGRKWSKAVEF 486


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,720,017
Number of Sequences: 37544
Number of extensions: 209025
Number of successful extensions: 424
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)