Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305H09f
(457 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical pr... 169 8e-43
U39645-5|AAU05591.1| 345|Caenorhabditis elegans Hypothetical pr... 31 0.30
U39645-4|AAU05592.1| 341|Caenorhabditis elegans Hypothetical pr... 30 0.92
AL132848-1|CAB60388.2| 381|Caenorhabditis elegans Hypothetical ... 29 1.6
Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z75712-8|CAB00047.1| 319|Caenorhabditis elegans Hypothetical pr... 27 8.6
U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated p... 27 8.6
U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated p... 27 8.6
M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related... 27 8.6
AF022979-10|AAB69905.3| 651|Caenorhabditis elegans Nematode ast... 27 8.6
>Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical
protein T24B8.1 protein.
Length = 134
Score = 169 bits (411), Expect = 8e-43
Identities = 75/124 (60%), Positives = 103/124 (83%)
Frame = +1
Query: 37 IVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLP 216
+VKK+ +F RH+SDRY ++ +WRKP+GIDNRVRRRF+G MP IG+GS+++TR +LP
Sbjct: 11 VVKKKLTKFKRHESDRYRRVAPSWRKPKGIDNRVRRRFRGMRAMPTIGHGSDRRTRFVLP 70
Query: 217 NGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLRS 396
NG++KVLV NVK+L++L+MQ+ KY EI HGVS+K RK IVERA QL+I++TN ARLR+
Sbjct: 71 NGYKKVLVQNVKDLDMLLMQSYKYIGEIGHGVSAKSRKGIVERAAQLNIKLTNGNARLRT 130
Query: 397 QENE 408
+E+E
Sbjct: 131 EESE 134
>U39645-5|AAU05591.1| 345|Caenorhabditis elegans Hypothetical
protein C14F11.4a protein.
Length = 345
Score = 31.5 bits (68), Expect = 0.30
Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Frame = +1
Query: 25 YRPTIVKKRT--KRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKK 198
Y P + KK +RFI ++R+D + RN P R + + Q L+ + Y S+ +
Sbjct: 4 YPPLVTKKEIIYRRFIDDHNERFDNIVRN---PTSYPPRAPKPERPQNLVVSHNYHSDVE 60
Query: 199 TRHMLPNGFRKV--LVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVT 372
+ L +K+ ++ ++ ++A +++ K I +R +L +T
Sbjct: 61 AEYQLSKINKKLDRIIEILRSPSTKKTSQEPPIIDVARQEQTRQYKDICDRLDKLEAELT 120
Query: 373 NAAARLRSQENE 408
+ +NE
Sbjct: 121 GKTQFVAPLQNE 132
>U39645-4|AAU05592.1| 341|Caenorhabditis elegans Hypothetical
protein C14F11.4b protein.
Length = 341
Score = 29.9 bits (64), Expect = 0.92
Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
Frame = +1
Query: 25 YRPTIVKKRT--KRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKK 198
Y P + KK +RFI ++R+D + RN P R + + Q L+ + Y S+ +
Sbjct: 4 YPPLVTKKEIIYRRFIDDHNERFDNIVRN---PTSYPPRAPKPERPQNLVVSHNYHSDVE 60
Query: 199 TRHMLPNGFRKV--LVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVT 372
+ L +K+ ++ ++ ++A +++ K I +R +L +T
Sbjct: 61 AEYQLSKINKKLDRIIEILRSPSTKKTSQEPPIIDVARQEQTRQYKDICDRLDKLEAELT 120
Query: 373 NAA 381
A
Sbjct: 121 FVA 123
>AL132848-1|CAB60388.2| 381|Caenorhabditis elegans Hypothetical
protein Y47H10A.2 protein.
Length = 381
Score = 29.1 bits (62), Expect = 1.6
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +1
Query: 157 QYLMPNIGYGSNKKTRHMLPNGFRKVLVHNVKELEILMMQN 279
QYLM NI R P+GF K L+ + L+I QN
Sbjct: 213 QYLMNNIDLKYGLLIRCWHPSGFDKELLSGIPRLDIFYAQN 253
>Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical protein
K07G5.3 protein.
Length = 1202
Score = 27.1 bits (57), Expect = 6.5
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -2
Query: 150 ESPADSVVN-TSRFTPIPLKFVIAIRLMPDKSLRPLFDDCRPVNRSYSHLV 1
E P +S+ T R++ +P +++ +R+ ++ ++ FD+ R HLV
Sbjct: 1058 EEPLESIQTATVRYSKLPEDWIVELRISLEREIKIRFDESRKHAIPQWHLV 1108
>Z75712-8|CAB00047.1| 319|Caenorhabditis elegans Hypothetical
protein K04G2.10 protein.
Length = 319
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 3 QDGYKTCLQADNRQKEDEEIYQASIGSL*QT*EEL 107
QD K + D+RQKE E Y+ IGS+ + E++
Sbjct: 238 QDMVKYMEENDDRQKESIEKYKRKIGSMKKVIEKM 272
>U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated
protein 104, isoforma protein.
Length = 1584
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -2
Query: 402 LLGPEASGRIRHSDAELLGSFHDQLPLLRRDTVSDLCAVL 283
LL P + G +R + LLG + D L + + D+C ++
Sbjct: 154 LLNPNSGGNLRVREHPLLGPYVDDLTKMAVCSYHDICNLM 193
>U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated
protein 104, isoformb protein.
Length = 1628
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -2
Query: 402 LLGPEASGRIRHSDAELLGSFHDQLPLLRRDTVSDLCAVL 283
LL P + G +R + LLG + D L + + D+C ++
Sbjct: 154 LLNPNSGGNLRVREHPLLGPYVDDLTKMAVCSYHDICNLM 193
>M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related
protein protein.
Length = 1584
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -2
Query: 402 LLGPEASGRIRHSDAELLGSFHDQLPLLRRDTVSDLCAVL 283
LL P + G +R + LLG + D L + + D+C ++
Sbjct: 154 LLNPNSGGNLRVREHPLLGPYVDDLTKMAVCSYHDICNLM 193
>AF022979-10|AAB69905.3| 651|Caenorhabditis elegans Nematode
astacin protease protein32 protein.
Length = 651
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -2
Query: 396 GPEASGRIRHSDAELLGSFHDQLPLLRRDTVSDLCAVLPVLHHQDF 259
G E +G H A LG FH Q+ R D V+ +P Q+F
Sbjct: 282 GCEVTGTAAHEIAHTLGLFHTQMRSDRDDYVTIDLTDVPESSQQNF 327
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,820,436
Number of Sequences: 27780
Number of extensions: 198230
Number of successful extensions: 618
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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