Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS305H09f
(457 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49 ... 264 4e-73
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 1.2
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 23 1.6
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 3.6
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 3.6
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 3.6
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 21 4.8
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 21 6.3
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 21 6.3
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 21 6.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 8.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 8.4
>AF441189-1|AAL73401.1| 134|Apis mellifera ribosomal protein 49
protein.
Length = 134
Score = 264 bits (646), Expect = 4e-73
Identities = 124/134 (92%), Positives = 129/134 (96%)
Frame = +1
Query: 7 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYG 186
MAIRPVYRPTIVKKRTK+FIRHQSDRY KLKRNWRKP+GIDNRVRRRFKGQYLMPNIGYG
Sbjct: 1 MAIRPVYRPTIVKKRTKKFIRHQSDRYSKLKRNWRKPKGIDNRVRRRFKGQYLMPNIGYG 60
Query: 187 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 366
SNKKTRHMLP GFRKVLVHNVKELE+LMMQNRK+CAEIAHG SSKKRK IVERAQQLSIR
Sbjct: 61 SNKKTRHMLPTGFRKVLVHNVKELEVLMMQNRKFCAEIAHGGSSKKRKSIVERAQQLSIR 120
Query: 367 VTNAAARLRSQENE 408
VT A+ARLRSQENE
Sbjct: 121 VTYASARLRSQENE 134
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.4 bits (48), Expect = 1.2
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +1
Query: 163 LMPNIGYGSNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVE 342
L + G + + +P+G+ + + EL L + + + + HG+ R LIV+
Sbjct: 66 LAAKVWNGQYARVQQSMPDGWETEISDQMLELRDLPISGKPFQIRMKHGLI---RDLIVD 122
Query: 343 R 345
R
Sbjct: 123 R 123
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 23.0 bits (47), Expect = 1.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3
Query: 437 FWNL*YNYIYSFSWDRRRAAAFVTLMLSCWALSTISF 327
+W + + Y RRRAA + ++ C S ISF
Sbjct: 145 YWAITDPFTYPSKMSRRRAAVLIAIVWIC--SSAISF 179
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 429 LIIQLYLFVLLGPEASGRI 373
L + +LFV+ ++SGRI
Sbjct: 15 LFVNSFLFVIAAQDSSGRI 33
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 429 LIIQLYLFVLLGPEASGRI 373
L + +LFV+ ++SGRI
Sbjct: 15 LFVNSFLFVIAAQDSSGRI 33
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -2
Query: 429 LIIQLYLFVLLGPEASGRI 373
L + +LFV+ ++SGRI
Sbjct: 15 LFVNSFLFVIAAQDSSGRI 33
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.4 bits (43), Expect = 4.8
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3
Query: 138 PQAIQGSILDAQHRLRFQQED 200
P+ S LD +HR+ + +ED
Sbjct: 182 PRDYTASDLDVEHRVAYWRED 202
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 21.0 bits (42), Expect = 6.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 396 GPEASGRIRHSDA 358
GP GR +H+DA
Sbjct: 45 GPNELGRFKHTDA 57
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.0 bits (42), Expect = 6.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 396 GPEASGRIRHSDA 358
GP GR +H+DA
Sbjct: 50 GPNELGRFKHTDA 62
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.0 bits (42), Expect = 6.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 396 GPEASGRIRHSDA 358
GP GR +H+DA
Sbjct: 50 GPNELGRFKHTDA 62
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.6 bits (41), Expect = 8.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 285 LPVLHHQDFQLFNI 244
LP L H D Q FN+
Sbjct: 1031 LPELRHGDIQGFNV 1044
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.6 bits (41), Expect = 8.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 285 LPVLHHQDFQLFNI 244
LP L H D Q FN+
Sbjct: 1027 LPELRHGDIQGFNV 1040
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,875
Number of Sequences: 438
Number of extensions: 2456
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12066642
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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